RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 FGD1P98174 961 aa21.24■□□□□ 0.99
SYNGR3-204ENST00000564642 DUSP28Q4G0W2 176 aa21.24■□□□□ 0.99
SYNGR3-204ENST00000564642 RAB11FIP4Q86YS3 637 aa21.24■□□□□ 0.99
SYNGR3-204ENST00000564642 KCNB2Q92953 911 aa21.24■□□□□ 0.99
SYNGR3-204ENST00000564642 IWS1Q96ST2 819 aa21.24■□□□□ 0.99
SYNGR3-204ENST00000564642 COL20A1Q9P218 1284 aa21.24■□□□□ 0.99
SYNGR3-204ENST00000564642 RBM47A0AV96 593 aaKnown RBP21.23■□□□□ 0.99
SYNGR3-204ENST00000564642 OPLAHO14841 1288 aa21.23■□□□□ 0.99
SYNGR3-204ENST00000564642 BEX3Q00994 111 aa21.23■□□□□ 0.99
SYNGR3-204ENST00000564642 STXBP2Q15833 593 aa21.23■□□□□ 0.99
SYNGR3-204ENST00000564642 FSCN1Q16658 493 aaKnown RBP21.23■□□□□ 0.99
SYNGR3-204ENST00000564642 MICU3Q86XE3 530 aa21.23■□□□□ 0.99
SYNGR3-204ENST00000564642 SRBD1Q8N5C6 995 aaKnown RBP21.23■□□□□ 0.99
SYNGR3-204ENST00000564642 SCFD2Q8WU76 684 aa21.23■□□□□ 0.99
SYNGR3-204ENST00000564642 A0A0C4DFX4 3053 aa21.23■□□□□ 0.99
SYNGR3-204ENST00000564642 GCOM1H8Y6P7 765 aaPredicted RBP21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 CTAGE5O15320 804 aa21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 PLEKHA8P1O95397 391 aa21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 POLR2MP0CAP2 368 aa21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 EIF2AK2P19525 551 aaKnown RBP21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 GHRHRQ02643 423 aa21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 TMEM63BQ5T3F8 832 aa21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 CMTR1Q8N1G2 835 aaKnown RBP21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 JAKMIP1Q96N16 626 aaKnown RBP21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 SNX14Q9Y5W7 946 aa21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 ELP1O95163 1332 aa21.22■□□□□ 0.99
SYNGR3-204ENST00000564642 NKRFO15226 690 aaKnown RBP eCLIP21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 EPB41L2O43491 1005 aaKnown RBP21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 PTGS1P23219 599 aa21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 HOXA13P31271 388 aaPredicted RBP21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 MAGEA10P43363 369 aaPredicted RBP21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 TLE2Q04725 743 aa21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 PPP2R5BQ15173 497 aa21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 APOA5Q6Q788 366 aa21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 BLOC1S2Q6QNY1 142 aa21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 CCDC82Q8N4S0 544 aa21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 GDF15Q99988 308 aa21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 LBHD1Q9BQE6 289 aaPredicted RBP21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 PRO3102Q9H379 93 aa21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 PRDM5Q9NQX1 630 aaPredicted RBP21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 PXMP2Q9NR77 195 aa21.21■□□□□ 0.99
SYNGR3-204ENST00000564642 CEP290O15078 2479 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 KIAA1217Q5T5P2 1943 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 ZBTB43O43298 467 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 PQBP1O60828 265 aaKnown RBP21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 NR3C2P08235 984 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 TXNP10599 105 aaKnown RBP21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 PSMA5P28066 241 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 BMP8BP34820 402 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 TTLL4Q14679 1199 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 SEPT14Q6ZU15 432 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 FCHSD1Q86WN1 690 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 OR6J1Q8NGC5 347 aa21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 RBM28Q9NW13 759 aaKnown RBP21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 NAP1L2Q9ULW6 460 aaPredicted RBP21.2■□□□□ 0.98
SYNGR3-204ENST00000564642 A0A0U1RQG5 324 aaPredicted RBP21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 DCDC2CA8MYV0 355 aa21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 EIF3JO75822 258 aaKnown RBP21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 CABYRO75952 493 aa21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 CPA1P15085 419 aa21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 MDM2Q00987 491 aaPredicted RBP21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 BRDTQ58F21 947 aaPredicted RBP21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 CXCL17Q6UXB2 119 aa21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 TMTC3Q6ZXV5 915 aa21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 UBE2OQ9C0C9 1292 aaKnown RBP21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 BRPF3Q9ULD4 1205 aa21.19■□□□□ 0.98
SYNGR3-204ENST00000564642 KLF18A0A0U1RQI7 1052 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 A0A1W2PPC1 479 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 CLTBP09497 229 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 MYCLP12524 364 aaPredicted RBP21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 CPT1AP50416 773 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 RTN1Q16799 776 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 Q6ZUG5 572 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 CUL5Q93034 780 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 TOX2Q96NM4 488 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 PDCD2LQ9BRP1 358 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 MROH7Q68CQ1 1323 aa21.18■□□□□ 0.98
SYNGR3-204ENST00000564642 ARVCFO00192 962 aa21.17■□□□□ 0.98
SYNGR3-204ENST00000564642 ANKRD33Q7Z3H0 272 aa21.17■□□□□ 0.98
SYNGR3-204ENST00000564642 SMARCC2Q8TAQ2 1214 aa21.17■□□□□ 0.98
SYNGR3-204ENST00000564642 USP26Q9BXU7 913 aa21.17■□□□□ 0.98
SYNGR3-204ENST00000564642 PDLIM7Q9NR12 457 aa21.17■□□□□ 0.98
SYNGR3-204ENST00000564642 GOLGA8AA7E2F4 631 aa21.16■□□□□ 0.98
SYNGR3-204ENST00000564642 GOLGA8BA8MQT2 603 aa21.16■□□□□ 0.98
SYNGR3-204ENST00000564642 CASTP20810 708 aaKnown RBP21.16■□□□□ 0.98
SYNGR3-204ENST00000564642 PGM5Q15124 567 aa21.16■□□□□ 0.98
SYNGR3-204ENST00000564642 SH3RF1Q7Z6J0 888 aa21.16■□□□□ 0.98
SYNGR3-204ENST00000564642 COPS5Q92905 334 aa21.16■□□□□ 0.98
SYNGR3-204ENST00000564642 TMEM39AQ9NV64 488 aa21.16■□□□□ 0.98
SYNGR3-204ENST00000564642 POLR3EQ9NVU0 708 aa21.16■□□□□ 0.98
SYNGR3-204ENST00000564642 hCG_1642624A0A1W2PR95 340 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 TRIM43BA6NCK2 446 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 TLR3O15455 904 aaKnown RBP21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 ARIH2O95376 493 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 MYL3P08590 195 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 RPS6KB1P23443 525 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 CCND2P30279 289 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 CDK7P50613 346 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 APOBRQ0VD83 1088 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 ITGA7Q13683 1181 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms