RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 RCSD1Q6JBY9 416 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 CPNE8Q86YQ8 564 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 JAMLQ86YT9 394 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 SLC16A11Q8NCK7 471 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 SYT3Q9BQG1 590 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.02□□□□□ -1.61
CHD9-211ENST00000564600 GPRC5CQ9NQ84 441 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 AKT3Q9Y243 479 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 MYRFQ9Y2G1 1151 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 EMC9Q9Y3B6 208 aa5.02□□□□□ -1.61
CHD9-211ENST00000564600 A0A1W2PQ27 194 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 A0A1W2PQ64 194 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 A0A1W2PQC6 194 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 A0A1W2PQD8 194 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 C2orf71A6NGG8 1288 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 F8W031 263 aaPredicted RBP5.01□□□□□ -1.61
CHD9-211ENST00000564600 ARNTLO00327 626 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 KCNH1O95259 989 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 SSBP05455 408 aaKnown RBP eCLIP5.01□□□□□ -1.61
CHD9-211ENST00000564600 DBHP09172 617 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 PFKLP17858 780 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 DNAJA1P31689 397 aaKnown RBP5.01□□□□□ -1.61
CHD9-211ENST00000564600 PRR5P85299 388 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 CYP2R1Q6VVX0 501 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 MRGPRX3Q96LB0 322 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 NOX5Q96PH1 765 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 ACTR10Q9NZ32 417 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 PRKAG3Q9UGI9 489 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 BACE2Q9Y5Z0 518 aa5.01□□□□□ -1.61
CHD9-211ENST00000564600 L1CAMP32004 1257 aa5□□□□□ -1.61
CHD9-211ENST00000564600 AMPD2Q01433 879 aa5□□□□□ -1.61
CHD9-211ENST00000564600 TMEM62Q0P6H9 643 aa5□□□□□ -1.61
CHD9-211ENST00000564600 SCRN1Q12765 414 aa5□□□□□ -1.61
CHD9-211ENST00000564600 GRB10Q13322 594 aa5□□□□□ -1.61
CHD9-211ENST00000564600 SF1Q15637 639 aaKnown RBP5□□□□□ -1.61
CHD9-211ENST00000564600 ZFYVE27Q5T4F4 411 aa5□□□□□ -1.61
CHD9-211ENST00000564600 EEF1DP3Q658K8 133 aa5□□□□□ -1.61
CHD9-211ENST00000564600 FAM178BQ8IXR5 827 aa5□□□□□ -1.61
CHD9-211ENST00000564600 CELF2-AS1Q8N7Q2 184 aa5□□□□□ -1.61
CHD9-211ENST00000564600 BVESQ8NE79 360 aa5□□□□□ -1.61
CHD9-211ENST00000564600 COPS5Q92905 334 aa5□□□□□ -1.61
CHD9-211ENST00000564600 C8orf49Q96NF6 230 aa5□□□□□ -1.61
CHD9-211ENST00000564600 SMPD4Q9NXE4 827 aa5□□□□□ -1.61
CHD9-211ENST00000564600 CLEC1BQ9P126 229 aa5□□□□□ -1.61
CHD9-211ENST00000564600 GULP1Q9UBP9 304 aa5□□□□□ -1.61
CHD9-211ENST00000564600 PALD1Q9ULE6 856 aa5□□□□□ -1.61
CHD9-211ENST00000564600 FAN1Q9Y2M0 1017 aa5□□□□□ -1.61
CHD9-211ENST00000564600 RWDD3Q9Y3V2 267 aa5□□□□□ -1.61
CHD9-211ENST00000564600 NOBOXO60393 691 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 GJB6O95452 261 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 TBC1D8O95759 1140 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 ITGAVP06756 1048 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 PLS3P13797 630 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 SEPHS1P49903 392 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 ARID5AQ03989 594 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 NCAPHQ15003 741 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 GTF2IRD2BQ6EKJ0 949 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 SAPCD2Q86UD0 394 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 GTF2IRD2Q86UP8 949 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 VPS37DQ86XT2 251 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 TRIM59Q8IWR1 403 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 NLGN1Q8N2Q7 840 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 HNRNPLLQ8WVV9 542 aaKnown RBP4.99□□□□□ -1.61
CHD9-211ENST00000564600 PPP1R14AQ96A00 147 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 APBA2Q99767 749 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 PDLIM7Q9NR12 457 aa4.99□□□□□ -1.61
CHD9-211ENST00000564600 A0A1W2PQJ5 194 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 C7orf72A4D263 438 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 OVOL3O00110 214 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 SUSD5O60279 629 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 DDAH1O94760 285 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 THBDP07204 575 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 ASGR2P07307 311 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 GLI4P10075 376 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 HTRA3P83110 453 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 INF2Q27J81 1249 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 ZNF227Q86WZ6 799 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 NLGN2Q8NFZ4 835 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 BTN2A2Q8WVV5 523 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 DPF3Q92784 378 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 LOXL4Q96JB6 756 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 MTA3Q9BTC8 594 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 ST7Q9NRC1 585 aa4.98□□□□□ -1.61
CHD9-211ENST00000564600 TMEFF2Q9UIK5 374 aaPredicted RBP4.98□□□□□ -1.61
CHD9-211ENST00000564600 DBR1Q9UK59 544 aaKnown RBP4.98□□□□□ -1.61
CHD9-211ENST00000564600 NPHP3-ACAD11A0A0J9YXS1 232 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 SRGAP3O43295 1099 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 ITGB3P05106 788 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 PMLP29590 882 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 GRIA2P42262 883 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 ZNF143P52747 638 aaPredicted RBP4.97□□□□□ -1.61
CHD9-211ENST00000564600 SMAD4Q13485 552 aaKnown RBP4.97□□□□□ -1.61
CHD9-211ENST00000564600 NR1I3Q14994 352 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 PRSS53Q2L4Q9 553 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 SV2CQ496J9 727 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 TNNI3KQ59H18 835 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 DENND5AQ6IQ26 1287 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 PAQR3Q6TCH7 311 aa4.97□□□□□ -1.61
CHD9-211ENST00000564600 CCDC103Q8IW40 242 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms