RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 AFG3L2Q9Y4W6 797 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 PHIPQ8WWQ0 1821 aa17.56■□□□□ 0.4
COMMD4-210ENST00000564587 OPLAHO14841 1288 aa17.55■□□□□ 0.4
COMMD4-210ENST00000564587 GTPBP6O43824 516 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-210ENST00000564587 EDIL3O43854 480 aa17.55■□□□□ 0.4
COMMD4-210ENST00000564587 TXKP42681 527 aa17.55■□□□□ 0.4
COMMD4-210ENST00000564587 CABP7Q86V35 215 aa17.55■□□□□ 0.4
COMMD4-210ENST00000564587 MLKLQ8NB16 471 aa17.55■□□□□ 0.4
COMMD4-210ENST00000564587 GTPBP4Q9BZE4 634 aaKnown RBP17.55■□□□□ 0.4
COMMD4-210ENST00000564587 LRWD1Q9UFC0 647 aa17.55■□□□□ 0.4
COMMD4-210ENST00000564587 A0A087X0B3 334 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 UNCXA6NJT0 531 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 SLC37A4O43826 429 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 CFBP00751 764 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 TECP42680 631 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 COG2Q14746 738 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 IQCB1Q15051 598 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 PDXDC2PQ6P474 469 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 ANKRD13AQ8IZ07 590 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 FAM20AQ96MK3 541 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 TAF1DQ9H5J8 278 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-210ENST00000564587 RMND1Q9NWS8 449 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 HOXC10Q9NYD6 342 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 PCDHA12Q9UN75 941 aa17.54■□□□□ 0.4
COMMD4-210ENST00000564587 ZNF536O15090 1300 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 ADM5C9JUS6 153 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 IKBKBO14920 756 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 DSG3P32926 999 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 ZNF76P36508 570 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 HSD17B4P51659 736 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 HMGCS2P54868 508 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 AMPD3Q01432 767 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 PPATQ06203 517 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 TKFCQ3LXA3 575 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 COL13A1Q5TAT6 717 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-210ENST00000564587 KRT79Q5XKE5 535 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-210ENST00000564587 C11orf57Q6ZUT1 292 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-210ENST00000564587 LUZP1Q86V48 1076 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 TRIM44Q96DX7 344 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-210ENST00000564587 CDCA5Q96FF9 252 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 LRRC27Q9C0I9 530 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 TTC12Q9H892 705 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-210ENST00000564587 KCNMB3Q9NPA1 279 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 STK17AQ9UEE5 414 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 SNCAIPQ9Y6H5 919 aa17.53■□□□□ 0.4
COMMD4-210ENST00000564587 WDR90Q96KV7 1748 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 BIN1O00499 593 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 VWA5AO00534 786 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 HOXA7P31268 230 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-210ENST00000564587 APLP1P51693 650 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 DPYDQ12882 1025 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 VGLL4Q14135 290 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 MORC3Q14149 939 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 KARSQ15046 597 aaKnown RBP17.52■□□□□ 0.4
COMMD4-210ENST00000564587 DPCR1Q3MIW9 517 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 HS1BP3Q53T59 392 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-210ENST00000564587 CATSPERGQ6ZRH7 1159 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 ARMC9Q7Z3E5 817 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 ERO1BQ86YB8 467 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 KCTD17Q8N5Z5 321 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 ERCC4Q92889 916 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-210ENST00000564587 CCDC47Q96A33 483 aaKnown RBP17.52■□□□□ 0.4
COMMD4-210ENST00000564587 CDK5RAP3Q96JB5 506 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 MAN1B1Q9UKM7 699 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 ADAMTS5Q9UNA0 930 aa17.52■□□□□ 0.4
COMMD4-210ENST00000564587 KDM3AQ9Y4C1 1321 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 CXCL11O14625 94 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 ATP2A1O14983 1001 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 HOXA13P31271 388 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-210ENST00000564587 AFMP43652 599 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 FCHSD1Q86WN1 690 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 ERMNQ8TAM6 284 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 HAS1Q92839 578 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 AGBL1Q96MI9 1066 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 NT5C3AQ9H0P0 336 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 PAPPA2Q9BXP8 1791 aa17.51■□□□□ 0.39
COMMD4-210ENST00000564587 PARP14Q460N5 1801 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-210ENST00000564587 FOXN1O15353 648 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 ADCY5O95622 1261 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 PRR29P0C7W0 189 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 ALAS1P13196 640 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 SETQ01105 290 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-210ENST00000564587 PRKG1Q13976 671 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 SARM1Q6SZW1 724 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 CPXCR1Q8N123 301 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 PROCA1Q8NCQ7 364 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-210ENST00000564587 CLEC4DQ8WXI8 215 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 RAVER2Q9HCJ3 691 aaKnown RBP17.5■□□□□ 0.39
COMMD4-210ENST00000564587 KBTBD4Q9NVX7 518 aa17.5■□□□□ 0.39
COMMD4-210ENST00000564587 PLCG1P19174 1290 aa17.49■□□□□ 0.39
COMMD4-210ENST00000564587 ERCC5P28715 1186 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-210ENST00000564587 CDC25AP30304 524 aa17.49■□□□□ 0.39
COMMD4-210ENST00000564587 TTLL12Q14166 644 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-210ENST00000564587 PRR16Q569H4 304 aa17.49■□□□□ 0.39
COMMD4-210ENST00000564587 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-210ENST00000564587 HYIQ5T013 277 aa17.49■□□□□ 0.39
COMMD4-210ENST00000564587 HAUS3Q68CZ6 603 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms