RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 GNEQ9Y223 722 aaKnown RBP19.96■□□□□ 0.79
USB1-209ENST00000564387 HOXA13P31271 388 aaPredicted RBP19.95■□□□□ 0.78
USB1-209ENST00000564387 AK2P54819 239 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 LRRC41Q15345 812 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 PKN1Q16512 942 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 PFKFB3Q16875 520 aaPredicted RBP19.95■□□□□ 0.78
USB1-209ENST00000564387 ANO1Q5XXA6 986 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 TYW1BQ6NUM6 668 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 PPP1R18Q6NYC8 613 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 NECAB2Q7Z6G3 386 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 PDCD2LQ9BRP1 358 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 RNF26Q9BY78 433 aaPredicted RBP19.95■□□□□ 0.78
USB1-209ENST00000564387 NCOA5Q9HCD5 579 aaKnown RBP19.95■□□□□ 0.78
USB1-209ENST00000564387 XPNPEP3Q9NQH7 507 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 PDGFCQ9NRA1 345 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 BARHL2Q9NY43 387 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 TPCN1Q9ULQ1 816 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 Q9Y3F1 56 aa19.95■□□□□ 0.78
USB1-209ENST00000564387 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.94■□□□□ 0.78
USB1-209ENST00000564387 NR3C2P08235 984 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 CST5P28325 142 aaPredicted RBP19.94■□□□□ 0.78
USB1-209ENST00000564387 ADCYAP1R1P41586 468 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 GJA9P57773 515 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 TNFAIP2Q03169 654 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 PDE4DQ08499 809 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 CCSAPQ6IQ19 270 aaPredicted RBP19.94■□□□□ 0.78
USB1-209ENST00000564387 VSIG10LQ86VR7 867 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 FBXO16Q8IX29 292 aaPredicted RBP19.94■□□□□ 0.78
USB1-209ENST00000564387 KLHDC9Q8NEP7 349 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 LARP6Q9BRS8 491 aaKnown RBP19.94■□□□□ 0.78
USB1-209ENST00000564387 C22orf23Q9BZE7 217 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 PSTPIP2Q9H939 334 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 SYNRGQ9UMZ2 1314 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 DNAH12Q6ZR08 3092 aa19.94■□□□□ 0.78
USB1-209ENST00000564387 STXBP3O00186 592 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 CTAGE5O15320 804 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 PFKFB2O60825 505 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 SCG2P13521 617 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 SMPD1P17405 629 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 NEK4P51957 841 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 CCT2P78371 535 aaKnown RBP19.93■□□□□ 0.78
USB1-209ENST00000564387 STXBP2Q15833 593 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 DUSP28Q4G0W2 176 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 ARHGEF16Q5VV41 709 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 USP17L6PQ6QN14 398 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 EEPD1Q7L9B9 569 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 HEATR3Q7Z4Q2 680 aa19.93■□□□□ 0.78
USB1-209ENST00000564387 GPKOWQ92917 476 aaPredicted RBP eCLIP19.93■□□□□ 0.78
USB1-209ENST00000564387 LENG1Q96BZ8 264 aaPredicted RBP19.93■□□□□ 0.78
USB1-209ENST00000564387 TSEN34Q9BSV6 310 aaKnown RBP19.93■□□□□ 0.78
USB1-209ENST00000564387 EIF3JO75822 258 aaKnown RBP19.92■□□□□ 0.78
USB1-209ENST00000564387 PGK1P00558 417 aa19.92■□□□□ 0.78
USB1-209ENST00000564387 EIF2AK2P19525 551 aaKnown RBP19.92■□□□□ 0.78
USB1-209ENST00000564387 PGM5Q15124 567 aa19.92■□□□□ 0.78
USB1-209ENST00000564387 CCDC62Q6P9F0 684 aa19.92■□□□□ 0.78
USB1-209ENST00000564387 C11orf49Q9H6J7 331 aa19.92■□□□□ 0.78
USB1-209ENST00000564387 RIC8AQ9NPQ8 531 aa19.92■□□□□ 0.78
USB1-209ENST00000564387 ESYT2A0FGR8 921 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 SCRN1Q12765 414 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 TMEM63BQ5T3F8 832 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 GJC2Q5T442 439 aaPredicted RBP19.91■□□□□ 0.78
USB1-209ENST00000564387 RNF180Q86T96 592 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 IL27Q8NEV9 243 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 SCFD2Q8WU76 684 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 CUL5Q93034 780 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 PHKBQ93100 1093 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 PHF24Q9UPV7 400 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 KIAA1217Q5T5P2 1943 aa19.91■□□□□ 0.78
USB1-209ENST00000564387 NKRFO15226 690 aaKnown RBP eCLIP19.9■□□□□ 0.78
USB1-209ENST00000564387 RGS20O76081 388 aa19.9■□□□□ 0.78
USB1-209ENST00000564387 FCHSD1Q86WN1 690 aa19.9■□□□□ 0.78
USB1-209ENST00000564387 IL31RAQ8NI17 732 aa19.9■□□□□ 0.78
USB1-209ENST00000564387 SMARCC2Q8TAQ2 1214 aa19.9■□□□□ 0.78
USB1-209ENST00000564387 HTATIP2Q9BUP3 242 aa19.9■□□□□ 0.78
USB1-209ENST00000564387 WDR11Q9BZH6 1224 aa19.9■□□□□ 0.78
USB1-209ENST00000564387 ZMYND12Q9H0C1 365 aa19.9■□□□□ 0.78
USB1-209ENST00000564387 GLT8D2Q9H1C3 349 aa19.9■□□□□ 0.78
USB1-209ENST00000564387 PDE4DIPQ5VU43 2346 aa19.9■□□□□ 0.78
USB1-209ENST00000564387 KBTBD13C9JR72 458 aa19.89■□□□□ 0.77
USB1-209ENST00000564387 STAM2O75886 525 aa19.89■□□□□ 0.77
USB1-209ENST00000564387 CLK2P49760 499 aaKnown RBP19.89■□□□□ 0.77
USB1-209ENST00000564387 NAPAP54920 295 aa19.89■□□□□ 0.77
USB1-209ENST00000564387 MRPS9P82933 396 aaKnown RBP19.89■□□□□ 0.77
USB1-209ENST00000564387 ME3Q16798 604 aa19.89■□□□□ 0.77
USB1-209ENST00000564387 XRRA1Q6P2D8 792 aa19.89■□□□□ 0.77
USB1-209ENST00000564387 SLC26A6Q9BXS9 759 aa19.89■□□□□ 0.77
USB1-209ENST00000564387 SLKQ9H2G2 1235 aaPredicted RBP19.89■□□□□ 0.77
USB1-209ENST00000564387 SH3GLB2Q9NR46 395 aa19.89■□□□□ 0.77
USB1-209ENST00000564387 MYADML2A6NDP7 307 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 SMCO2A6NFE2 343 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 MOXD2PA6NHM9 499 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 ARIH2O95376 493 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 STK3Q13188 491 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 SNX17Q15036 470 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 C1orf53Q5VUE5 145 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 PCNX4Q63HM2 1172 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 TLK2Q86UE8 772 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 FAM177A1Q8N128 213 aaPredicted RBP19.88■□□□□ 0.77
USB1-209ENST00000564387 BACH2Q9BYV9 841 aa19.88■□□□□ 0.77
USB1-209ENST00000564387 SPC25Q9HBM1 224 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms