RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 EIF2AK2P19525 551 aaKnown RBP23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 HSD17B4P51659 736 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 NFXL1Q6ZNB6 911 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 OR6J1Q8NGC5 347 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 NSUN6Q8TEA1 469 aaKnown RBP23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 SCFD2Q8WU76 684 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 PIBF1Q8WXW3 757 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 COPS5Q92905 334 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 TMEM87BQ96K49 555 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 MTA3Q9BTC8 594 aa23.18■■□□□ 1.3
SHCBP1-203ENST00000564272 CABYRO75952 493 aa23.17■■□□□ 1.3
SHCBP1-203ENST00000564272 ARIH2O95376 493 aa23.17■■□□□ 1.3
SHCBP1-203ENST00000564272 RAG1P15918 1043 aa23.17■■□□□ 1.3
SHCBP1-203ENST00000564272 CTCFLQ8NI51 663 aaPredicted RBP23.17■■□□□ 1.3
SHCBP1-203ENST00000564272 TBX21Q9UL17 535 aa23.17■■□□□ 1.3
SHCBP1-203ENST00000564272 PNMA6FA0A0J9YX94 578 aa23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 CCDC69A6NI79 296 aa23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 TXNP10599 105 aaKnown RBP23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 RXRAP19793 462 aa23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 HOXA13P31271 388 aaPredicted RBP23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 PSMC6P62333 389 aa23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 GHRHRQ02643 423 aa23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 ARHGEF16Q5VV41 709 aa23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 RAB11FIP4Q86YS3 637 aa23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 FAM126BQ8IXS8 530 aa23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 PXMP2Q9NR77 195 aa23.16■■□□□ 1.3
SHCBP1-203ENST00000564272 GRIN2DO15399 1336 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 NEFLP07196 543 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 ITGA7Q13683 1181 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 TTLL4Q14679 1199 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 C9orf50Q5SZB4 431 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 RNF20Q5VTR2 975 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 SEPT14Q6ZU15 432 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 SLC43A3Q8NBI5 491 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 IWS1Q96ST2 819 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 MAP3K14Q99558 947 aa23.15■■□□□ 1.3
SHCBP1-203ENST00000564272 KIAA1217Q5T5P2 1943 aa23.14■■□□□ 1.3
SHCBP1-203ENST00000564272 NKRFO15226 690 aaKnown RBP eCLIP23.14■■□□□ 1.29
SHCBP1-203ENST00000564272 PLEKHA8P1O95397 391 aa23.14■■□□□ 1.29
SHCBP1-203ENST00000564272 MYL3P08590 195 aa23.14■■□□□ 1.29
SHCBP1-203ENST00000564272 KIF5BP33176 963 aa23.14■■□□□ 1.29
SHCBP1-203ENST00000564272 LIFRP42702 1097 aa23.14■■□□□ 1.29
SHCBP1-203ENST00000564272 CPT1AP50416 773 aa23.14■■□□□ 1.29
SHCBP1-203ENST00000564272 SHHQ15465 462 aa23.14■■□□□ 1.29
SHCBP1-203ENST00000564272 STXBP2Q15833 593 aa23.14■■□□□ 1.29
SHCBP1-203ENST00000564272 SPZ1Q9BXG8 430 aa23.14■■□□□ 1.29
SHCBP1-203ENST00000564272 TLR3O15455 904 aaKnown RBP23.13■■□□□ 1.29
SHCBP1-203ENST00000564272 NR3C2P08235 984 aa23.13■■□□□ 1.29
SHCBP1-203ENST00000564272 EPHB4P54760 987 aa23.13■■□□□ 1.29
SHCBP1-203ENST00000564272 CCDC62Q6P9F0 684 aa23.13■■□□□ 1.29
SHCBP1-203ENST00000564272 RASEFQ8IZ41 740 aa23.13■■□□□ 1.29
SHCBP1-203ENST00000564272 TMTC2Q8N394 836 aa23.13■■□□□ 1.29
SHCBP1-203ENST00000564272 TCEANC2Q96MN5 208 aa23.13■■□□□ 1.29
SHCBP1-203ENST00000564272 GCOM1H8Y6P7 765 aaPredicted RBP23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 TIMP1P01033 207 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 CD4P01730 458 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 POLR2MP0CAP2 368 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 PURAQ00577 322 aaKnown RBP23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 FPGSQ05932 587 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 TRAF1Q13077 416 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 LY6KQ17RY6 165 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 ADCK5Q3MIX3 580 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 CMTR1Q8N1G2 835 aaKnown RBP23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 SRBD1Q8N5C6 995 aaKnown RBP23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 IL31RAQ8NI17 732 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 NEK1Q96PY6 1258 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 PDCD2LQ9BRP1 358 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 POLR3EQ9NVU0 708 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 SLC12A7Q9Y666 1083 aa23.12■■□□□ 1.29
SHCBP1-203ENST00000564272 FCHSD1Q86WN1 690 aa23.11■■□□□ 1.29
SHCBP1-203ENST00000564272 RRP36Q96EU6 259 aaKnown RBP23.11■■□□□ 1.29
SHCBP1-203ENST00000564272 PPP1R12CQ9BZL4 782 aa23.11■■□□□ 1.29
SHCBP1-203ENST00000564272 MAP3K20Q9NYL2 800 aaKnown RBP23.11■■□□□ 1.29
SHCBP1-203ENST00000564272 A6NJR5 290 aa23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 EIF3JO75822 258 aaKnown RBP23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 CALM1P0DP23 149 aa23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 CALM2P0DP24 149 aa23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 CALM3P0DP25 149 aa23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 MYCLP12524 364 aaPredicted RBP23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 BRDTQ58F21 947 aaPredicted RBP23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 MICU3Q86XE3 530 aa23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 SAMD3Q8N6K7 520 aa23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 LZTS2Q9BRK4 669 aa23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 MTG1Q9BT17 334 aaPredicted RBP23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 TRPV6Q9H1D0 765 aa23.1■■□□□ 1.29
SHCBP1-203ENST00000564272 SCN10AQ9Y5Y9 1956 aa23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 B4GALT4O60513 344 aa23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 GNAQP50148 359 aa23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 ARHGAP1Q07960 439 aa23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 PGM5Q15124 567 aa23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 TSGA10IPQ3SY00 556 aa23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 Q7L0L9 218 aa23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 SGMS1Q86VZ5 419 aa23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 PPP1R13LQ8WUF5 828 aa23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 SEC63Q9UGP8 760 aaKnown RBP23.09■■□□□ 1.29
SHCBP1-203ENST00000564272 RGS20O76081 388 aa23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 GH1P01241 217 aa23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 SMARCA1P28370 1054 aa23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 EXOSC10Q01780 885 aaKnown RBP23.08■■□□□ 1.29
SHCBP1-203ENST00000564272 MFSD5Q6N075 450 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms