RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 PLA2G4EQ3MJ16 856 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 DCAF15Q66K64 600 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 ZAR1Q86SH2 424 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 JAZF1Q86VZ6 243 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 FAM177A1Q8N128 213 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 TMEM151AQ8N4L1 468 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 ZNF526Q8TF50 670 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 VWCEQ96DN2 955 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 MFSD14AQ96MC6 490 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 HAUS7Q99871 368 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 ASPNQ9BXN1 380 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 PRDM5Q9NQX1 630 aaPredicted RBP8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 CCDC7Q96M83 1385 aa8.1□□□□□ -1.11
HERPUD1-208ENST00000563911 ABCC6O95255 1503 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 CNTNAP4Q9C0A0 1308 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 ANKRD34BA5PLL1 514 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 CBX7O95931 251 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 EPHX1P07099 455 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 NAT2P11245 290 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 FBLN1P23142 703 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 GSK3AP49840 483 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 AUHQ13825 339 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 TCEAL1Q15170 157 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 SV2CQ496J9 727 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 CYP27C1Q4G0S4 372 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 SPATC1Q76KD6 591 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 ADAT2Q7Z6V5 191 aaKnown RBP8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 NME9Q86XW9 330 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 LILRB2Q8N423 598 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 GATA6Q92908 595 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 FBXL18Q96ME1 805 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 APBA2Q99767 749 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 GTF2IRD1Q9UHL9 959 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 FBXL21Q9UKT6 434 aa8.09□□□□□ -1.11
HERPUD1-208ENST00000563911 KDM2BQ8NHM5 1336 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 LRRN2O75325 713 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 IL2RBP14784 551 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 ZNF143P52747 638 aaPredicted RBP8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 SSRP1Q08945 709 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 SFRP5Q5T4F7 317 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 DUSP27Q5VZP5 1158 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 RNF43Q68DV7 783 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 SDE2Q6IQ49 451 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 C7orf61Q8IZ16 206 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 SHISA5Q8N114 240 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 PPP1R14AQ96A00 147 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 FGD4Q96M96 766 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 GBP3Q9H0R5 595 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 EPN3Q9H201 632 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 CWC22Q9HCG8 908 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 TFCP2L1Q9NZI6 479 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 ZNF451Q9Y4E5 1061 aa8.08□□□□□ -1.12
HERPUD1-208ENST00000563911 CD163L1Q9NR16 1453 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 QSER1Q2KHR3 1735 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 FAM170BA6NMN3 283 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 RBAK-RBAKDNI3L0D1 243 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 AGRPO00253 132 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 POLD1P28340 1107 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 CYP27A1Q02318 531 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 DOC2BQ14184 412 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 SLC10A6Q3KNW5 377 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 ANKRD39Q53RE8 183 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 ZNF765Q7L2R6 523 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 KCNH5Q8NCM2 988 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 ZNF669Q96BR6 464 aaPredicted RBP8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 COX4I2Q96KJ9 171 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 RNPC3Q96LT9 517 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 LRP2BPQ9P2M1 347 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 SUSD2Q9UGT4 822 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 ZMYM5Q9UJ78 669 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 SUGT1Q9Y2Z0 365 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 PCDHB12Q9Y5F1 795 aa8.07□□□□□ -1.12
HERPUD1-208ENST00000563911 QRICH2Q9H0J4 1663 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 IQCA1LA6NCM1 817 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 CBFA2T2O43439 604 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 DIAPH1O60610 1272 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 ITGB2P05107 769 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 CD247P20963 164 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 HTRA3P83110 453 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 NFIAQ12857 509 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 NBPF9Q3BBW0 867 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 NOL9Q5SY16 702 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 FAM214BQ7L5A3 538 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 SH3TC2Q8TF17 1288 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 HEXIM2Q96MH2 286 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 KLHL25Q9H0H3 589 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 KCNH3Q9ULD8 1083 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 SBNO2Q9Y2G9 1366 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 KIAA1210Q9ULL0 1709 aa8.06□□□□□ -1.12
HERPUD1-208ENST00000563911 PPM1BO75688 479 aa8.05□□□□□ -1.12
HERPUD1-208ENST00000563911 F13BP05160 661 aa8.05□□□□□ -1.12
HERPUD1-208ENST00000563911 KIR3DL1P43629 444 aa8.05□□□□□ -1.12
HERPUD1-208ENST00000563911 NLGN1Q8N2Q7 840 aa8.05□□□□□ -1.12
HERPUD1-208ENST00000563911 GP6Q9HCN6 339 aa8.05□□□□□ -1.12
HERPUD1-208ENST00000563911 ATG3Q9NT62 314 aa8.05□□□□□ -1.12
HERPUD1-208ENST00000563911 TTC21AQ8NDW8 1320 aa8.04□□□□□ -1.12
HERPUD1-208ENST00000563911 LY75O60449 1722 aa8.04□□□□□ -1.12
HERPUD1-208ENST00000563911 GNAT3A8MTJ3 354 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms