RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 SLC43A3Q8NBI5 491 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 PXMP2Q9NR77 195 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 GRIN2DO15399 1336 aa17.16■□□□□ 0.34
RPUSD1-204ENST00000563560 CCDC69A6NI79 296 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 REC8O95072 547 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 CALM1P0DP23 149 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 CALM2P0DP24 149 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 CALM3P0DP25 149 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 KIF5BP33176 963 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 RCAN1P53805 252 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 EVCP57679 992 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 BEX3Q00994 111 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 ANKRD33Q7Z3H0 272 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 IL31RAQ8NI17 732 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 CTCFLQ8NI51 663 aaPredicted RBP17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 NSUN6Q8TEA1 469 aaKnown RBP17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 IWS1Q96ST2 819 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 RMDN3Q96TC7 470 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 PDCD2LQ9BRP1 358 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 PDLIM7Q9NR12 457 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 SLC12A7Q9Y666 1083 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 ELP1O95163 1332 aa17.15■□□□□ 0.34
RPUSD1-204ENST00000563560 MEIS2O14770 477 aa17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 CFBP00751 764 aa17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 ITGB8P26012 769 aa17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 CDC27P30260 824 aa17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 MAGEA10P43363 369 aaPredicted RBP17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 GNAQP50148 359 aa17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 SH3RF1Q7Z6J0 888 aa17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 MICU3Q86XE3 530 aa17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 IL17RAQ96F46 866 aa17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 WDR11Q9BZH6 1224 aa17.14■□□□□ 0.33
RPUSD1-204ENST00000563560 TRIM43BA6NCK2 446 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 PIK3CDO00329 1044 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 NR3C2P08235 984 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 RPS6KB1P23443 525 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 HOXA13P31271 388 aaPredicted RBP17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 FXR1P51114 621 aaKnown RBP eCLIP17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 TLE2Q04725 743 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 PDE4DQ08499 809 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 FSCN1Q16658 493 aaKnown RBP17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 GNASQ5JWF2 1037 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 NFXL1Q6ZNB6 911 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 VSIG10LQ86VR7 867 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 SCFD2Q8WU76 684 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 COPS5Q92905 334 aa17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 TRIM43Q96BQ3 446 aaPredicted RBP17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 JAKMIP1Q96N16 626 aaKnown RBP17.13■□□□□ 0.33
RPUSD1-204ENST00000563560 A6NJR5 290 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 DYNC1LI2O43237 492 aaPredicted RBP17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 EIF2AK2P19525 551 aaKnown RBP17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 FAAP100Q0VG06 881 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 PGM5Q15124 567 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 TYW1BQ6NUM6 668 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 Q6ZUG5 572 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 RRP36Q96EU6 259 aaKnown RBP17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 TOX2Q96NM4 488 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 ZSWIM6Q9HCJ5 1215 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 STARD7Q9NQZ5 370 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 ATP11BQ9Y2G3 1177 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 CDH23Q9H251 3354 aa17.12■□□□□ 0.33
RPUSD1-204ENST00000563560 A0A1W2PPC1 479 aa17.11■□□□□ 0.33
RPUSD1-204ENST00000563560 hCG_1642624A0A1W2PR95 340 aa17.11■□□□□ 0.33
RPUSD1-204ENST00000563560 NKRFO15226 690 aaKnown RBP eCLIP17.11■□□□□ 0.33
RPUSD1-204ENST00000563560 MRPS9P82933 396 aaKnown RBP17.11■□□□□ 0.33
RPUSD1-204ENST00000563560 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
RPUSD1-204ENST00000563560 TRAF1Q13077 416 aa17.11■□□□□ 0.33
RPUSD1-204ENST00000563560 CXCL17Q6UXB2 119 aa17.11■□□□□ 0.33
RPUSD1-204ENST00000563560 PIBF1Q8WXW3 757 aa17.11■□□□□ 0.33
RPUSD1-204ENST00000563560 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 GCOM1H8Y6P7 765 aaPredicted RBP17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 ARVCFO00192 962 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 KIAA0355O15063 1070 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 ZBTB43O43298 467 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 EIF3JO75822 258 aaKnown RBP17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 CD4P01730 458 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 POLR2MP0CAP2 368 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 PURAQ00577 322 aaKnown RBP17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 APOBRQ0VD83 1088 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 TOB2Q14106 344 aaPredicted RBP17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 STXBP2Q15833 593 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 NTRK3Q16288 839 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 BLOC1S2Q6QNY1 142 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 FAM126BQ8IXS8 530 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 EMID1Q96A84 441 aaPredicted RBP17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 SPC25Q9HBM1 224 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 RBM28Q9NW13 759 aaKnown RBP17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 DDX41Q9UJV9 622 aaKnown RBP17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 TBX21Q9UL17 535 aa17.1■□□□□ 0.33
RPUSD1-204ENST00000563560 A0A0U1RQG5 324 aaPredicted RBP17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 SLC34A2O95436 690 aa17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 HOXD8P13378 290 aaPredicted RBP17.09■□□□□ 0.33
RPUSD1-204ENST00000563560 CASTP20810 708 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms