RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 APEX2Q9UBZ4 518 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 UNC13AQ9UPW8 1703 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 CNTLNQ9NXG0 1405 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 POLR1AO95602 1720 aaPredicted RBP4.6□□□□□ -1.67
LINC01416-201ENST00000563553 ZC3H12DA2A288 527 aaKnown RBP4.6□□□□□ -1.67
LINC01416-201ENST00000563553 UNCXA6NJT0 531 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 POU4F1Q01851 419 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 GNPTABQ3T906 1256 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 BICRALQ6AI39 1079 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 NT5DC4Q86YG4 428 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 JAMLQ86YT9 394 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 CXorf38Q8TB03 319 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 PKNOX2Q96KN3 472 aa4.6□□□□□ -1.67
LINC01416-201ENST00000563553 DIS3Q9Y2L1 958 aaKnown RBP4.6□□□□□ -1.67
LINC01416-201ENST00000563553 A0A1B0GTL3 188 aa4.59□□□□□ -1.67
LINC01416-201ENST00000563553 TCERG1O14776 1098 aaKnown RBP4.59□□□□□ -1.67
LINC01416-201ENST00000563553 EIF6P56537 245 aaKnown RBP4.59□□□□□ -1.67
LINC01416-201ENST00000563553 NFKB2Q00653 900 aa4.59□□□□□ -1.67
LINC01416-201ENST00000563553 EEF1DP3Q658K8 133 aa4.59□□□□□ -1.67
LINC01416-201ENST00000563553 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
LINC01416-201ENST00000563553 ZDHHC14Q8IZN3 488 aa4.59□□□□□ -1.67
LINC01416-201ENST00000563553 ASGR2P07307 311 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 NOP2P46087 812 aaKnown RBP4.58□□□□□ -1.68
LINC01416-201ENST00000563553 RWDD3Q9Y3V2 267 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 CCDC18Q5T9S5 1454 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 LRRC9Q6ZRR7 1453 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 F8W031 263 aaPredicted RBP4.58□□□□□ -1.68
LINC01416-201ENST00000563553 PRICKLE3O43900 615 aaPredicted RBP4.58□□□□□ -1.68
LINC01416-201ENST00000563553 TBC1D8O95759 1140 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 SLURP1P55000 103 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 CASP7P55210 303 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 SLC7A5Q01650 507 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 TCEAL1Q15170 157 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 DPY19L1Q2PZI1 675 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 SAPCD2Q86UD0 394 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 SP8Q8IXZ3 490 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 ZNF526Q8TF50 670 aaPredicted RBP4.58□□□□□ -1.68
LINC01416-201ENST00000563553 RCC1LQ96I51 464 aaKnown RBP4.58□□□□□ -1.68
LINC01416-201ENST00000563553 LGR4Q9BXB1 951 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 JAG2Q9Y219 1238 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 THOC2Q8NI27 1593 aaKnown RBP4.58□□□□□ -1.68
LINC01416-201ENST00000563553 TONSLQ96HA7 1378 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 ARHGEF11O15085 1522 aa4.58□□□□□ -1.68
LINC01416-201ENST00000563553 ARHGAP35Q9NRY4 1499 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 SASH1O94885 1247 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 PMLP29590 882 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 NASPP49321 788 aaPredicted RBP4.57□□□□□ -1.68
LINC01416-201ENST00000563553 FOXO4P98177 505 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 HEATR6Q6AI08 1181 aaKnown RBP4.57□□□□□ -1.68
LINC01416-201ENST00000563553 CPNE8Q86YQ8 564 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 COPS5Q92905 334 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 TSPAN17Q96FV3 270 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 RNF38Q9H0F5 515 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.57□□□□□ -1.68
LINC01416-201ENST00000563553 UACAQ9BZF9 1416 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 AQRO60306 1485 aaKnown RBP eCLIP4.57□□□□□ -1.68
LINC01416-201ENST00000563553 C2orf71A6NGG8 1288 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 SYN1P17600 705 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 GRB10Q13322 594 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 LIPIQ6XZB0 460 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 SPATA32Q96LK8 384 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 GULP1Q9UBP9 304 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 BACE2Q9Y5Z0 518 aa4.57□□□□□ -1.68
LINC01416-201ENST00000563553 A0A1W2PQ27 194 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 A0A1W2PQ64 194 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 A0A1W2PQC6 194 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 A0A1W2PQD8 194 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 C7orf72A4D263 438 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 ARNTLO00327 626 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 DPF3Q92784 378 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 TEPSINQ96N21 525 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 NOX5Q96PH1 765 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 SYT3Q9BQG1 590 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 SLC12A7Q9Y666 1083 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 KDM5BQ9UGL1 1544 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 LTBP4Q8N2S1 1624 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 SH3D21A4FU49 640 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 PFKLP17858 780 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 FRMD5Q7Z6J6 570 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 B3GNT8Q7Z7M8 397 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 OR6P1Q8NGX9 317 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 MRRFQ96E11 262 aaKnown RBP4.56□□□□□ -1.68
LINC01416-201ENST00000563553 CRBNQ96SW2 442 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 ACBD3Q9H3P7 528 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 SIT1Q9Y3P8 196 aa4.56□□□□□ -1.68
LINC01416-201ENST00000563553 HFM1A2PYH4 1435 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 KIF27Q86VH2 1401 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 HECW1Q76N89 1606 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 TARBP2Q15633 366 aaKnown RBP4.55□□□□□ -1.68
LINC01416-201ENST00000563553 KIAA1211LQ6NV74 962 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 PLEKHO2Q8TD55 490 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 GBP3Q9H0R5 595 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 NUDCQ9Y266 331 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 EMC9Q9Y3B6 208 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 NCOA1Q15788 1441 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 AKNAQ7Z591 1439 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 ZMYM4Q5VZL5 1548 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 TBX1O43435 398 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 AMPD2Q01433 879 aa4.55□□□□□ -1.68
LINC01416-201ENST00000563553 WWC2Q6AWC2 1192 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms