RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ZBTB43O43298 467 aa32.73■■■□□ 2.83
NME3-203ENST00000563367 RPS6KB1P23443 525 aa32.73■■■□□ 2.83
NME3-203ENST00000563367 MRPL12P52815 198 aaKnown RBP32.73■■■□□ 2.83
NME3-203ENST00000563367 BEX3Q00994 111 aa32.73■■■□□ 2.83
NME3-203ENST00000563367 GNASQ5JWF2 1037 aa32.73■■■□□ 2.83
NME3-203ENST00000563367 PXMP2Q9NR77 195 aa32.73■■■□□ 2.83
NME3-203ENST00000563367 MAP3K20Q9NYL2 800 aaKnown RBP32.73■■■□□ 2.83
NME3-203ENST00000563367 hCG_1642624A0A1W2PR95 340 aa32.72■■■□□ 2.83
NME3-203ENST00000563367 DYNC1LI2O43237 492 aaPredicted RBP32.72■■■□□ 2.83
NME3-203ENST00000563367 EIF2AK2P19525 551 aaKnown RBP32.72■■■□□ 2.83
NME3-203ENST00000563367 CASTP20810 708 aaKnown RBP32.72■■■□□ 2.83
NME3-203ENST00000563367 DUSP28Q4G0W2 176 aa32.72■■■□□ 2.83
NME3-203ENST00000563367 ARHGEF16Q5VV41 709 aa32.72■■■□□ 2.83
NME3-203ENST00000563367 IWS1Q96ST2 819 aa32.72■■■□□ 2.83
NME3-203ENST00000563367 SEC63Q9UGP8 760 aaKnown RBP32.72■■■□□ 2.83
NME3-203ENST00000563367 MOXD2PA6NHM9 499 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 ASGR1P07306 291 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 FGD1P98174 961 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 APOBRQ0VD83 1088 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 TRIM60Q495X7 471 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 CHRDL2Q6WN34 429 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 SAMD3Q8N6K7 520 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 PCSK9Q8NBP7 692 aaKnown RBP32.71■■■□□ 2.83
NME3-203ENST00000563367 AP5M1Q9H0R1 490 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 ATP11BQ9Y2G3 1177 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 Q9Y3F1 56 aa32.71■■■□□ 2.83
NME3-203ENST00000563367 GCOM1H8Y6P7 765 aaPredicted RBP32.7■■■□□ 2.83
NME3-203ENST00000563367 POLR2MP0CAP2 368 aa32.7■■■□□ 2.83
NME3-203ENST00000563367 PSMA5P28066 241 aa32.7■■■□□ 2.83
NME3-203ENST00000563367 RTN1Q16799 776 aa32.7■■■□□ 2.83
NME3-203ENST00000563367 C1orf53Q5VUE5 145 aa32.7■■■□□ 2.83
NME3-203ENST00000563367 BRF1Q92994 677 aa32.7■■■□□ 2.83
NME3-203ENST00000563367 FAM217BQ9NTX9 383 aaPredicted RBP32.7■■■□□ 2.83
NME3-203ENST00000563367 RBM28Q9NW13 759 aaKnown RBP32.7■■■□□ 2.83
NME3-203ENST00000563367 NR3C2P08235 984 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 CDC27P30260 824 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 FUT2Q10981 343 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 STXBP2Q15833 593 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 FSCN1Q16658 493 aaKnown RBP32.68■■■□□ 2.82
NME3-203ENST00000563367 FCHSD1Q86WN1 690 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 FBXL16Q8N461 479 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 SCFD2Q8WU76 684 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 AGXT2Q9BYV1 514 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 STARD7Q9NQZ5 370 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 NAP1L2Q9ULW6 460 aaPredicted RBP32.68■■■□□ 2.82
NME3-203ENST00000563367 CNTNAP5Q8WYK1 1306 aa32.68■■■□□ 2.82
NME3-203ENST00000563367 MYH7BA7E2Y1 1941 aa32.67■■■□□ 2.82
NME3-203ENST00000563367 GOLGA8AA7E2F4 631 aa32.67■■■□□ 2.82
NME3-203ENST00000563367 GOLGA8BA8MQT2 603 aa32.67■■■□□ 2.82
NME3-203ENST00000563367 ARIH2O95376 493 aa32.67■■■□□ 2.82
NME3-203ENST00000563367 PDCD2LQ9BRP1 358 aa32.67■■■□□ 2.82
NME3-203ENST00000563367 PRO3102Q9H379 93 aa32.67■■■□□ 2.82
NME3-203ENST00000563367 ZSWIM6Q9HCJ5 1215 aa32.67■■■□□ 2.82
NME3-203ENST00000563367 RCAN1P53805 252 aa32.66■■■□□ 2.82
NME3-203ENST00000563367 SEPT14Q6ZU15 432 aa32.66■■■□□ 2.82
NME3-203ENST00000563367 RUFY3Q7L099 469 aa32.66■■■□□ 2.82
NME3-203ENST00000563367 COPS5Q92905 334 aa32.66■■■□□ 2.82
NME3-203ENST00000563367 TLE2Q04725 743 aa32.65■■■□□ 2.82
NME3-203ENST00000563367 PPP2R5BQ15173 497 aa32.65■■■□□ 2.82
NME3-203ENST00000563367 CCDC62Q6P9F0 684 aa32.65■■■□□ 2.82
NME3-203ENST00000563367 IL31RAQ8NI17 732 aa32.65■■■□□ 2.82
NME3-203ENST00000563367 GLT1D1Q96MS3 346 aa32.65■■■□□ 2.82
NME3-203ENST00000563367 RBM27Q9P2N5 1060 aaKnown RBP32.65■■■□□ 2.82
NME3-203ENST00000563367 TRIOBPQ9H2D6 2365 aa32.65■■■□□ 2.82
NME3-203ENST00000563367 EIF3JO75822 258 aaKnown RBP32.64■■■□□ 2.82
NME3-203ENST00000563367 TXNP10599 105 aaKnown RBP32.64■■■□□ 2.82
NME3-203ENST00000563367 MYCLP12524 364 aaPredicted RBP32.64■■■□□ 2.82
NME3-203ENST00000563367 RANBP2P49792 3224 aaKnown RBP32.64■■■□□ 2.82
NME3-203ENST00000563367 LTBP2Q14767 1821 aa32.64■■■□□ 2.82
NME3-203ENST00000563367 PGM5Q15124 567 aa32.64■■■□□ 2.82
NME3-203ENST00000563367 CXCL17Q6UXB2 119 aa32.64■■■□□ 2.82
NME3-203ENST00000563367 OR6J1Q8NGC5 347 aa32.64■■■□□ 2.82
NME3-203ENST00000563367 ELP1O95163 1332 aa32.63■■■□□ 2.81
NME3-203ENST00000563367 ADD1P35611 737 aaKnown RBP32.63■■■□□ 2.81
NME3-203ENST00000563367 TTLL4Q14679 1199 aa32.63■■■□□ 2.81
NME3-203ENST00000563367 HABP4Q5JVS0 413 aaKnown RBP32.63■■■□□ 2.81
NME3-203ENST00000563367 USP17L6PQ6QN14 398 aa32.63■■■□□ 2.81
NME3-203ENST00000563367 GPKOWQ92917 476 aaPredicted RBP eCLIP32.63■■■□□ 2.81
NME3-203ENST00000563367 TM6SF1Q9BZW5 370 aa32.63■■■□□ 2.81
NME3-203ENST00000563367 MEIS2O14770 477 aa32.62■■■□□ 2.81
NME3-203ENST00000563367 NKRFO15226 690 aaKnown RBP eCLIP32.62■■■□□ 2.81
NME3-203ENST00000563367 METAP2P50579 478 aaKnown RBP eCLIP32.62■■■□□ 2.81
NME3-203ENST00000563367 VSIG10LQ86VR7 867 aa32.62■■■□□ 2.81
NME3-203ENST00000563367 VTI1AQ96AJ9 217 aa32.62■■■□□ 2.81
NME3-203ENST00000563367 GDF15Q99988 308 aa32.62■■■□□ 2.81
NME3-203ENST00000563367 V9GY48 417 aaPredicted RBP32.62■■■□□ 2.81
NME3-203ENST00000563367 PIK3CDO00329 1044 aa32.61■■■□□ 2.81
NME3-203ENST00000563367 RGS20O76081 388 aa32.61■■■□□ 2.81
NME3-203ENST00000563367 MAGEA10P43363 369 aaPredicted RBP32.61■■■□□ 2.81
NME3-203ENST00000563367 TOB2Q14106 344 aaPredicted RBP32.61■■■□□ 2.81
NME3-203ENST00000563367 LY6KQ17RY6 165 aa32.61■■■□□ 2.81
NME3-203ENST00000563367 HEATR3Q7Z4Q2 680 aa32.61■■■□□ 2.81
NME3-203ENST00000563367 ZFP91Q96JP5 570 aaPredicted RBP32.61■■■□□ 2.81
NME3-203ENST00000563367 UPF3BQ9BZI7 483 aaKnown RBP32.61■■■□□ 2.81
NME3-203ENST00000563367 CYP46A1Q9Y6A2 500 aa32.61■■■□□ 2.81
NME3-203ENST00000563367 NID2Q14112 1375 aa32.6■■■□□ 2.81
NME3-203ENST00000563367 FRMPD4Q14CM0 1322 aa32.6■■■□□ 2.81
NME3-203ENST00000563367 ZEB2O60315 1214 aa32.6■■■□□ 2.81
NME3-203ENST00000563367 PQBP1O60828 265 aaKnown RBP32.6■■■□□ 2.81
NME3-203ENST00000563367 WWC2Q6AWC2 1192 aa32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms