RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SMAD2Q15796 467 aaKnown RBP9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 CTC1Q2NKJ3 1217 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 TKFCQ3LXA3 575 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 TCEAL5Q5H9L2 206 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 FAM47CQ5HY64 1035 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 TRAF7Q6Q0C0 670 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 LRRC8DQ7L1W4 858 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 RNF135Q8IUD6 432 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 RPAP2Q8IXW5 612 aaPredicted RBP9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 TMEM57Q8N5G2 664 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 CAGE1Q8TC20 777 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 TRERF1Q96PN7 1200 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 ZBED2Q9BTP6 218 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 WDR11Q9BZH6 1224 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 UPF3BQ9BZI7 483 aaKnown RBP9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 CLIP2Q9UDT6 1046 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 SYNPO2Q9UMS6 1093 aa9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 CTDP1Q9Y5B0 961 aaPredicted RBP9.25□□□□□ -0.93
HERPUD1-206ENST00000563343 MBTPS2O43462 519 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 BMP3P12645 472 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 ALDH5A1P51649 535 aaPredicted RBP9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 MBTPS1Q14703 1052 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 PTGISQ16647 500 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 SBK1Q52WX2 424 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 TIGD5Q53EQ6 642 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 GDF6Q6KF10 455 aaPredicted RBP9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 SESTD1Q86VW0 696 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 LRRC47Q8N1G4 583 aaKnown RBP9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 BANK1Q8NDB2 785 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 OR6J1Q8NGC5 347 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 CLUAP1Q96AJ1 413 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 CEP95Q96GE4 821 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 FAM86C1Q9NVL1 165 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 MTMR4Q9NYA4 1195 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 FAM50BQ9Y247 325 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 PLIN4Q96Q06 1357 aa9.24□□□□□ -0.93
HERPUD1-206ENST00000563343 KMT2BQ9UMN6 2715 aaPredicted RBP9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 TMEM221A6NGB7 291 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 H3BNC9 293 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 M0R296 226 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 PLA2G6O60733 806 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 CKBP12277 381 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 ALAS1P13196 640 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 SELPP16109 830 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 DLX2Q07687 328 aaPredicted RBP9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 TRIM71Q2Q1W2 868 aaKnown RBP9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 EPC2Q52LR7 807 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 FAM117BQ6P1L5 589 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 TRIM67Q6ZTA4 783 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 RPAINQ86UA6 219 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 AMOTL1Q8IY63 956 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 RASEFQ8IZ41 740 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 SPOCK2Q92563 424 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 COPS5Q92905 334 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 DNAJC2Q99543 621 aaKnown RBP9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 PRRX2Q99811 253 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 PUS7LQ9H0K6 701 aaKnown RBP9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 NSUN3Q9H649 340 aaKnown RBP9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 IL1RAPL2Q9NP60 686 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 ARPP21Q9UBL0 812 aaPredicted RBP9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 CTNNA3Q9UI47 895 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 EXOC6BQ9Y2D4 811 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 INSL6Q9Y581 213 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 SLC4A4Q9Y6R1 1079 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 FAM186AA6NE01 2351 aa9.23□□□□□ -0.93
HERPUD1-206ENST00000563343 PLXNA4Q9HCM2 1894 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 LOC102724159A0A0B4J2E5 919 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 TMEM232C9JQI7 657 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 PROB1E7EW31 1015 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 IPO8O15397 1037 aaKnown RBP9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 KPNA6O60684 536 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 PARNO95453 639 aaKnown RBP9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 STAT2P52630 851 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 VCPP55072 806 aaKnown RBP9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 SNAP25P60880 206 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 PWP2Q15269 919 aaKnown RBP9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 UBE3CQ15386 1083 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 PKN1Q16512 942 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 PTPROQ16827 1216 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 SLFN13Q68D06 897 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 FAM160B2Q86V87 743 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 STK11IPQ8N1F8 1099 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 CCDC155Q8N6L0 562 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 STAG1Q8WVM7 1258 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 KAT2BQ92831 832 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 WNT8BQ93098 351 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 PBXIP1Q96AQ6 731 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 SAMD11Q96NU1 681 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 POP1Q99575 1024 aaKnown RBP9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 GPHNQ9NQX3 736 aaPredicted RBP9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 PAG1Q9NWQ8 432 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 CLDND1Q9NY35 253 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 WDR87Q6ZQQ6 2873 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 DMXL1Q9Y485 3027 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 ZNF292O60281 2723 aa9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 RIF1Q5UIP0 2472 aaKnown RBP9.22□□□□□ -0.93
HERPUD1-206ENST00000563343 MYH6P13533 1939 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms