RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 SRRDQ9UH36 339 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 CEP290O15078 2479 aa16.86■□□□□ 0.29
CDH11-207ENST00000563255 CCDC194A0A1B0GVG4 234 aa16.85■□□□□ 0.29
CDH11-207ENST00000563255 NFIBO00712 420 aa16.85■□□□□ 0.29
CDH11-207ENST00000563255 CCNA1P78396 465 aa16.85■□□□□ 0.29
CDH11-207ENST00000563255 FAM110CQ1W6H9 321 aa16.85■□□□□ 0.29
CDH11-207ENST00000563255 RILPL1Q5EBL4 403 aa16.85■□□□□ 0.29
CDH11-207ENST00000563255 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
CDH11-207ENST00000563255 RAET1EQ8TD07 263 aa16.85■□□□□ 0.29
CDH11-207ENST00000563255 TBC1D5Q92609 795 aa16.85■□□□□ 0.29
CDH11-207ENST00000563255 MROH8Q9H579 483 aa16.85■□□□□ 0.29
CDH11-207ENST00000563255 ZNF236Q9UL36 1845 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 SZT2Q5T011 3432 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 PEX10O60683 326 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 NONOQ15233 471 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDH11-207ENST00000563255 MTFR1Q15390 333 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 UBE2SQ16763 222 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 EARS2Q5JPH6 523 aaKnown RBP16.84■□□□□ 0.29
CDH11-207ENST00000563255 JAKMIP3Q5VZ66 844 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 PIK3AP1Q6ZUJ8 805 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 ANKRD13CQ8N6S4 541 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 RASGRP4Q8TDF6 673 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 ZNF396Q96N95 335 aaPredicted RBP16.84■□□□□ 0.29
CDH11-207ENST00000563255 HOMER2Q9NSB8 354 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 TMEM260Q9NX78 707 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 NOL7Q9UMY1 257 aaKnown RBP16.84■□□□□ 0.29
CDH11-207ENST00000563255 KIAA1217Q5T5P2 1943 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 DOCK3Q8IZD9 2030 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 TRIOBPQ9H2D6 2365 aa16.84■□□□□ 0.29
CDH11-207ENST00000563255 SPDYE3A6NKU9 549 aa16.83■□□□□ 0.28
CDH11-207ENST00000563255 BCRP11274 1271 aa16.83■□□□□ 0.28
CDH11-207ENST00000563255 ERCC3P19447 782 aa16.83■□□□□ 0.28
CDH11-207ENST00000563255 GRK4P32298 578 aa16.83■□□□□ 0.28
CDH11-207ENST00000563255 TRAPPC10P48553 1259 aa16.83■□□□□ 0.28
CDH11-207ENST00000563255 FAM173BQ6P4H8 233 aa16.83■□□□□ 0.28
CDH11-207ENST00000563255 RNF207Q6ZRF8 634 aa16.83■□□□□ 0.28
CDH11-207ENST00000563255 NCAPG2Q86XI2 1143 aa16.83■□□□□ 0.28
CDH11-207ENST00000563255 CFAP45Q9UL16 551 aa16.83■□□□□ 0.28
CDH11-207ENST00000563255 PFASO15067 1338 aa16.82■□□□□ 0.28
CDH11-207ENST00000563255 H0YGN5 161 aa16.82■□□□□ 0.28
CDH11-207ENST00000563255 BAG4O95429 457 aaKnown RBP16.82■□□□□ 0.28
CDH11-207ENST00000563255 HOXA13P31271 388 aaPredicted RBP16.82■□□□□ 0.28
CDH11-207ENST00000563255 TOB1P50616 345 aaPredicted RBP16.82■□□□□ 0.28
CDH11-207ENST00000563255 RPS6P62753 249 aaKnown RBP16.82■□□□□ 0.28
CDH11-207ENST00000563255 KRT85P78386 507 aa16.82■□□□□ 0.28
CDH11-207ENST00000563255 DNM1Q05193 864 aaKnown RBP16.82■□□□□ 0.28
CDH11-207ENST00000563255 ANO3Q9BYT9 981 aa16.82■□□□□ 0.28
CDH11-207ENST00000563255 EHMT1Q9H9B1 1298 aa16.82■□□□□ 0.28
CDH11-207ENST00000563255 FAM205CA6NFA0 338 aa16.81■□□□□ 0.28
CDH11-207ENST00000563255 USP11P51784 963 aa16.81■□□□□ 0.28
CDH11-207ENST00000563255 FCGRTP55899 365 aa16.81■□□□□ 0.28
CDH11-207ENST00000563255 BAATQ14032 418 aaPredicted RBP16.81■□□□□ 0.28
CDH11-207ENST00000563255 NSMFQ6X4W1 530 aa16.81■□□□□ 0.28
CDH11-207ENST00000563255 SYTL5Q8TDW5 730 aaPredicted RBP16.81■□□□□ 0.28
CDH11-207ENST00000563255 TBCKQ8TEA7 893 aa16.81■□□□□ 0.28
CDH11-207ENST00000563255 GBP4Q96PP9 640 aa16.81■□□□□ 0.28
CDH11-207ENST00000563255 A1CFQ9NQ94 594 aaKnown RBP16.81■□□□□ 0.28
CDH11-207ENST00000563255 CYP39A1Q9NYL5 469 aa16.81■□□□□ 0.28
CDH11-207ENST00000563255 LRRC37A2A6NM11 1700 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 INF2Q27J81 1249 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 CHRDL2Q6WN34 429 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 NEK8Q86SG6 692 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 FCHSD1Q86WN1 690 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 ANKRD35Q8N283 1001 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 CRYGNQ8WXF5 182 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 DPF3Q92784 378 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 PGBD1Q96JS3 809 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 USP28Q96RU2 1077 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 NAP1L4Q99733 375 aaKnown RBP16.8■□□□□ 0.28
CDH11-207ENST00000563255 RNF208Q9H0X6 261 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 PORCNQ9H237 461 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 POLR3EQ9NVU0 708 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 RTEL1Q9NZ71 1219 aa16.8■□□□□ 0.28
CDH11-207ENST00000563255 FRMPD4Q14CM0 1322 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 RPTORQ8N122 1335 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 MCM3APO60318 1980 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 STRNO43815 780 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 CYP3A4P08684 503 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 CCL5P13501 91 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 MAPK4P31152 587 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 SREBF1P36956 1147 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
CDH11-207ENST00000563255 PRKCZQ05513 592 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 ORC2Q13416 577 aaPredicted RBP16.79■□□□□ 0.28
CDH11-207ENST00000563255 FOXD4L6Q3SYB3 417 aaPredicted RBP16.79■□□□□ 0.28
CDH11-207ENST00000563255 TTC38Q5R3I4 469 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 ANO1Q5XXA6 986 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 MOXD1Q6UVY6 613 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 FOXD4L3Q6VB84 417 aaPredicted RBP16.79■□□□□ 0.28
CDH11-207ENST00000563255 SLC30A10Q6XR72 485 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 ABRAQ8N0Z2 381 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
CDH11-207ENST00000563255 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.79■□□□□ 0.28
CDH11-207ENST00000563255 COL20A1Q9P218 1284 aa16.79■□□□□ 0.28
CDH11-207ENST00000563255 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
CDH11-207ENST00000563255 EDIL3O43854 480 aa16.78■□□□□ 0.28
CDH11-207ENST00000563255 YEATS4O95619 227 aa16.78■□□□□ 0.28
CDH11-207ENST00000563255 FCER1AP12319 257 aa16.78■□□□□ 0.28
CDH11-207ENST00000563255 UBXN2AP68543 259 aa16.78■□□□□ 0.28
CDH11-207ENST00000563255 KCTD2Q14681 263 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms