RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 PPP2R5BQ15173 497 aa12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 CCDC62Q6P9F0 684 aa12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 FBXO11Q86XK2 927 aa12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 SLC17A8Q8NDX2 589 aa12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 MTMR8Q96EF0 704 aa12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 CDX2Q99626 313 aaPredicted RBP12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 NOC4LQ9BVI4 516 aaKnown RBP12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 SEMA6BQ9H3T3 888 aa12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 HIPK3Q9H422 1215 aa12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 TRMT13Q9NUP7 481 aaKnown RBP12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 A0A0C4DFX4 3053 aa12.89□□□□□ -0.35
KLHDC4-209ENST00000562872 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 TLR3O15455 904 aaKnown RBP12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 CYTH3O43739 400 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 ZEB2O60315 1214 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 TXNP10599 105 aaKnown RBP12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 CYP2C9P11712 490 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 EIF2AK2P19525 551 aaKnown RBP12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 PBX2P40425 430 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 CCL23P55773 120 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 PPIGQ13427 754 aaKnown RBP eCLIP12.88□□□□□ -0.353e-8■■■■■ 31.3
KLHDC4-209ENST00000562872 GRM4Q14833 912 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 LY6KQ17RY6 165 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 RASIP1Q5U651 963 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 ZNF365Q70YC5 407 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 HOMER1Q86YM7 354 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 MB21D2Q8IYB1 491 aaPredicted RBP12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 IL31RAQ8NI17 732 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 RUFY2Q8WXA3 655 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 MYLIPQ8WY64 445 aa12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 ALDH8A1Q9H2A2 487 aaPredicted RBP12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 CXXC1Q9P0U4 656 aaPredicted RBP12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 RBM8AQ9Y5S9 174 aaKnown RBP12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 U3KPZ7 1027 aaPredicted RBP12.88□□□□□ -0.35
KLHDC4-209ENST00000562872 A6NJR5 290 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 IFIT3O14879 490 aaKnown RBP12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 CFBP00751 764 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 HSD17B4P51659 736 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 ARHGAP1Q07960 439 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 TROAPQ12815 778 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 NBPF20Q3BBV1 942 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 SEPT14Q6ZU15 432 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 MAP4K1Q92918 833 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 SCLYQ96I15 445 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 PIGSQ96S52 555 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 RMDN3Q96TC7 470 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 MYL10Q9BUA6 226 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 MRPL11Q9Y3B7 192 aaKnown RBP12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 SCN10AQ9Y5Y9 1956 aa12.87□□□□□ -0.35
KLHDC4-209ENST00000562872 MYH6P13533 1939 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 CHD9Q3L8U1 2897 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 RGS20O76081 388 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 DNAJB2P25686 324 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 CPT1AP50416 773 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 TRDNQ13061 729 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 NSUN6Q8TEA1 469 aaKnown RBP12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 AFG1LQ8WV93 481 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 PIBF1Q8WXW3 757 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 ZFP91Q96JP5 570 aaPredicted RBP12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 MTG1Q9BT17 334 aaPredicted RBP12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 AMNQ9BXJ7 453 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 LSG1Q9H089 658 aaKnown RBP12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 IL23AQ9NPF7 189 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 PXMP2Q9NR77 195 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 POLR3EQ9NVU0 708 aa12.86□□□□□ -0.35
KLHDC4-209ENST00000562872 PRUNE2Q8WUY3 3088 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 ZBTB5O15062 677 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 NKRFO15226 690 aaKnown RBP eCLIP12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 SORBS3O60504 671 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 NR3C2P08235 984 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 CHMP4BP1P59074 171 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 GHRHRQ02643 423 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 TTLL4Q14679 1199 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 GRIN2CQ14957 1233 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 WTAPQ15007 396 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 FAM47CQ5HY64 1035 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 TMEM67Q5HYA8 995 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 ARHGEF16Q5VV41 709 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 RALYLQ86SE5 291 aaKnown RBP12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 MCF2L2Q86YR7 1114 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 KAT2BQ92831 832 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 PDCD2LQ9BRP1 358 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 PBX4Q9BYU1 374 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 RIOX1Q9H6W3 641 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 PCDHA1Q9Y5I3 950 aa12.85□□□□□ -0.35
KLHDC4-209ENST00000562872 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.84□□□□□ -0.35
KLHDC4-209ENST00000562872 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.84□□□□□ -0.35
KLHDC4-209ENST00000562872 MMP3P08254 477 aa12.84□□□□□ -0.35
KLHDC4-209ENST00000562872 STXBP2Q15833 593 aa12.84□□□□□ -0.35
KLHDC4-209ENST00000562872 PSRC1Q6PGN9 363 aaPredicted RBP12.84□□□□□ -0.35
KLHDC4-209ENST00000562872 OTOP2Q7RTS6 562 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms