RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 CCDC69A6NI79 296 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 PPP1R11O60927 126 aaPredicted RBP13.35□□□□□ -0.27
FANCA-209ENST00000562424 KIF5BP33176 963 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 ADCYAP1R1P41586 468 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 KRT32Q14532 448 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 TAPT1Q6NXT6 567 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 NFXL1Q6ZNB6 911 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 MCF2L2Q86YR7 1114 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 FBXO16Q8IX29 292 aaPredicted RBP13.35□□□□□ -0.27
FANCA-209ENST00000562424 KLHDC9Q8NEP7 349 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 CTCFLQ8NI51 663 aaPredicted RBP13.35□□□□□ -0.27
FANCA-209ENST00000562424 TBC1D5Q92609 795 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 KCNB2Q92953 911 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 NEK1Q96PY6 1258 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 TSEN34Q9BSV6 310 aaKnown RBP13.35□□□□□ -0.27
FANCA-209ENST00000562424 MYL10Q9BUA6 226 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
FANCA-209ENST00000562424 UPF3AQ9H1J1 476 aaKnown RBP13.35□□□□□ -0.27
FANCA-209ENST00000562424 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.34□□□□□ -0.27
FANCA-209ENST00000562424 OPLAHO14841 1288 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 REC8O95072 547 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 CALM1P0DP23 149 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 CALM2P0DP24 149 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 CALM3P0DP25 149 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 EDNRBP24530 442 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 CST5P28325 142 aaPredicted RBP13.34□□□□□ -0.27
FANCA-209ENST00000562424 HSPA4P34932 840 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 GJA9P57773 515 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 NKX3-2P78367 333 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
FANCA-209ENST00000562424 TNFAIP2Q03169 654 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 TRAF1Q13077 416 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 SNX17Q15036 470 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 ADCK5Q3MIX3 580 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 IQSEC1Q6DN90 963 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 CCSAPQ6IQ19 270 aaPredicted RBP13.34□□□□□ -0.27
FANCA-209ENST00000562424 SLC39A5Q6ZMH5 540 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 DHX32Q7L7V1 743 aaKnown RBP13.34□□□□□ -0.27
FANCA-209ENST00000562424 EEPD1Q7L9B9 569 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 SGMS1Q86VZ5 419 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 HOMER1Q86YM7 354 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 SYTL5Q8TDW5 730 aaPredicted RBP13.34□□□□□ -0.27
FANCA-209ENST00000562424 FERMT2Q96AC1 680 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 PIGSQ96S52 555 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 MPHOSPH6Q99547 160 aaKnown RBP13.34□□□□□ -0.27
FANCA-209ENST00000562424 SPZ1Q9BXG8 430 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 PCDHA1Q9Y5I3 950 aa13.34□□□□□ -0.27
FANCA-209ENST00000562424 CUL9Q8IWT3 2517 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 PNMA6FA0A0J9YX94 578 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 MYADML2A6NDP7 307 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 MOXD2PA6NHM9 499 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 B4DLN1 442 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 C6orf222P0C671 652 aaPredicted RBP13.33□□□□□ -0.28
FANCA-209ENST00000562424 SMARCA1P28370 1054 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 GNAQP50148 359 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 HSD17B4P51659 736 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 MRPL12P52815 198 aaKnown RBP13.33□□□□□ -0.28
FANCA-209ENST00000562424 RTP1P59025 263 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 GHRHRQ02643 423 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 KCNA10Q16322 511 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 C1orf53Q5VUE5 145 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 LZTS2Q9BRK4 669 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 PDGFCQ9NRA1 345 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 COL20A1Q9P218 1284 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 ZMYND8Q9ULU4 1186 aaPredicted RBP13.33□□□□□ -0.28
FANCA-209ENST00000562424 GNEQ9Y223 722 aaKnown RBP13.33□□□□□ -0.28
FANCA-209ENST00000562424 SLC12A7Q9Y666 1083 aa13.33□□□□□ -0.28
FANCA-209ENST00000562424 A0A1W2PQ45 241 aaPredicted RBP13.32□□□□□ -0.28
FANCA-209ENST00000562424 A0A1W2PQY0 241 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 RBM47A0AV96 593 aaKnown RBP13.32□□□□□ -0.28
FANCA-209ENST00000562424 CTAGE5O15320 804 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 EPB41L2O43491 1005 aaKnown RBP13.32□□□□□ -0.28
FANCA-209ENST00000562424 CFBP00751 764 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 HMGB1P09429 215 aaKnown RBP13.32□□□□□ -0.28
FANCA-209ENST00000562424 SMPD1P17405 629 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 ACLYP53396 1101 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 PDE4DQ08499 809 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 LRIT3Q3SXY7 679 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 NOL8Q76FK4 1167 aaKnown RBP13.32□□□□□ -0.28
FANCA-209ENST00000562424 TLK2Q86UE8 772 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 PCSK9Q8NBP7 692 aaKnown RBP13.32□□□□□ -0.28
FANCA-209ENST00000562424 NSUN6Q8TEA1 469 aaKnown RBP13.32□□□□□ -0.28
FANCA-209ENST00000562424 TCEANC2Q96MN5 208 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 TAAR1Q96RJ0 339 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 MAP3K20Q9NYL2 800 aaKnown RBP13.32□□□□□ -0.28
FANCA-209ENST00000562424 Q9Y3F1 56 aa13.32□□□□□ -0.28
FANCA-209ENST00000562424 PLEKHA8P1O95397 391 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 SYN1P17600 705 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 RXRAP19793 462 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 MFSD10Q14728 455 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 DUSP28Q4G0W2 176 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 GNASQ5JWF2 1037 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 TMEM63BQ5T3F8 832 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 APOA5Q6Q788 366 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 SRBD1Q8N5C6 995 aaKnown RBP13.31□□□□□ -0.28
FANCA-209ENST00000562424 FANCBQ8NB91 859 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
FANCA-209ENST00000562424 RRP36Q96EU6 259 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms