RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 COL9A1P20849 921 aa22.76■■□□□ 1.23
CDH11-203ENST00000562325 CALML3P27482 149 aa22.76■■□□□ 1.23
CDH11-203ENST00000562325 TOMM22Q9NS69 142 aa22.76■■□□□ 1.23
CDH11-203ENST00000562325 KIF28PB7ZC32 967 aa22.75■■□□□ 1.23
CDH11-203ENST00000562325 PARNO95453 639 aaKnown RBP22.75■■□□□ 1.23
CDH11-203ENST00000562325 IQCF3P0C7M6 154 aa22.75■■□□□ 1.23
CDH11-203ENST00000562325 SESTD1Q86VW0 696 aa22.75■■□□□ 1.23
CDH11-203ENST00000562325 CAGE1Q8TC20 777 aa22.75■■□□□ 1.23
CDH11-203ENST00000562325 RNF41Q9H4P4 317 aaPredicted RBP22.75■■□□□ 1.23
CDH11-203ENST00000562325 GPCPD1Q9NPB8 672 aa22.75■■□□□ 1.23
CDH11-203ENST00000562325 FRMPD2Q68DX3 1309 aaPredicted RBP22.75■■□□□ 1.23
CDH11-203ENST00000562325 TRANK1O15050 2925 aa22.75■■□□□ 1.23
CDH11-203ENST00000562325 XIRP2A4UGR9 3374 aa22.74■■□□□ 1.23
CDH11-203ENST00000562325 CA3P07451 260 aa22.74■■□□□ 1.23
CDH11-203ENST00000562325 HSPD1P10809 573 aaKnown RBP22.74■■□□□ 1.23
CDH11-203ENST00000562325 BMP1P13497 986 aa22.74■■□□□ 1.23
CDH11-203ENST00000562325 MYOGP15173 224 aa22.74■■□□□ 1.23
CDH11-203ENST00000562325 PDE1AP54750 535 aa22.74■■□□□ 1.23
CDH11-203ENST00000562325 FAM47CQ5HY64 1035 aa22.74■■□□□ 1.23
CDH11-203ENST00000562325 CCDC155Q8N6L0 562 aa22.74■■□□□ 1.23
CDH11-203ENST00000562325 COG5Q9UP83 839 aa22.74■■□□□ 1.23
CDH11-203ENST00000562325 TXNP10599 105 aaKnown RBP22.73■■□□□ 1.23
CDH11-203ENST00000562325 CCDC178Q5BJE1 867 aa22.73■■□□□ 1.23
CDH11-203ENST00000562325 RRP12Q5JTH9 1297 aaKnown RBP22.73■■□□□ 1.23
CDH11-203ENST00000562325 MFSD6Q6ZSS7 791 aa22.73■■□□□ 1.23
CDH11-203ENST00000562325 DEFB128Q7Z7B8 93 aa22.73■■□□□ 1.23
CDH11-203ENST00000562325 DGKHQ86XP1 1220 aa22.73■■□□□ 1.23
CDH11-203ENST00000562325 AFAP1L1Q8TED9 768 aa22.73■■□□□ 1.23
CDH11-203ENST00000562325 MTCH2Q9Y6C9 303 aa22.73■■□□□ 1.23
CDH11-203ENST00000562325 MFAP1P55081 439 aaKnown RBP22.72■■□□□ 1.23
CDH11-203ENST00000562325 RBL2Q08999 1139 aa22.72■■□□□ 1.23
CDH11-203ENST00000562325 ANKRD45Q5TZF3 282 aa22.72■■□□□ 1.23
CDH11-203ENST00000562325 CCDC62Q6P9F0 684 aa22.72■■□□□ 1.23
CDH11-203ENST00000562325 HERC6Q8IVU3 1022 aa22.72■■□□□ 1.23
CDH11-203ENST00000562325 ESR2Q92731 530 aa22.72■■□□□ 1.23
CDH11-203ENST00000562325 C1QTNF1Q9BXJ1 281 aa22.72■■□□□ 1.23
CDH11-203ENST00000562325 NOD1Q9Y239 953 aa22.72■■□□□ 1.23
CDH11-203ENST00000562325 A0A0D9SFI3 127 aa22.71■■□□□ 1.23
CDH11-203ENST00000562325 FAM227BQ96M60 508 aa22.71■■□□□ 1.23
CDH11-203ENST00000562325 IWS1Q96ST2 819 aa22.71■■□□□ 1.23
CDH11-203ENST00000562325 CCDC171Q6TFL3 1326 aa22.71■■□□□ 1.23
CDH11-203ENST00000562325 TANC1Q9C0D5 1861 aa22.71■■□□□ 1.23
CDH11-203ENST00000562325 PRRC2BQ5JSZ5 2229 aaKnown RBP22.7■■□□□ 1.23
CDH11-203ENST00000562325 HDAC1Q13547 482 aaPredicted RBP22.7■■□□□ 1.22
CDH11-203ENST00000562325 NSUN6Q8TEA1 469 aaKnown RBP22.7■■□□□ 1.22
CDH11-203ENST00000562325 FTOQ9C0B1 505 aaKnown RBP eCLIP22.7■■□□□ 1.22
CDH11-203ENST00000562325 ABCB11O95342 1321 aa22.69■■□□□ 1.22
CDH11-203ENST00000562325 TAP1Q03518 808 aa22.69■■□□□ 1.22
CDH11-203ENST00000562325 PTGISQ16647 500 aa22.69■■□□□ 1.22
CDH11-203ENST00000562325 MCF2L2Q86YR7 1114 aa22.69■■□□□ 1.22
CDH11-203ENST00000562325 EMID1Q96A84 441 aaPredicted RBP22.69■■□□□ 1.22
CDH11-203ENST00000562325 LMCD1Q9NZU5 365 aa22.69■■□□□ 1.22
CDH11-203ENST00000562325 GH1P01241 217 aa22.68■■□□□ 1.22
CDH11-203ENST00000562325 KCNJ6P48051 423 aa22.68■■□□□ 1.22
CDH11-203ENST00000562325 IQCA1Q86XH1 822 aa22.68■■□□□ 1.22
CDH11-203ENST00000562325 MICALL1Q8N3F8 863 aa22.68■■□□□ 1.22
CDH11-203ENST00000562325 ANKS1AQ92625 1134 aa22.68■■□□□ 1.22
CDH11-203ENST00000562325 EFCAB14O75071 495 aa22.67■■□□□ 1.22
CDH11-203ENST00000562325 ARIH2O95376 493 aa22.67■■□□□ 1.22
CDH11-203ENST00000562325 MMP3P08254 477 aa22.67■■□□□ 1.22
CDH11-203ENST00000562325 CASTP20810 708 aaKnown RBP22.67■■□□□ 1.22
CDH11-203ENST00000562325 SKIV2LQ15477 1246 aaKnown RBP22.67■■□□□ 1.22
CDH11-203ENST00000562325 STXBP2Q15833 593 aa22.67■■□□□ 1.22
CDH11-203ENST00000562325 ZNF589Q86UQ0 364 aaPredicted RBP22.67■■□□□ 1.22
CDH11-203ENST00000562325 COPS5Q92905 334 aa22.67■■□□□ 1.22
CDH11-203ENST00000562325 KATNAL1Q9BW62 490 aa22.67■■□□□ 1.22
CDH11-203ENST00000562325 SCN5AQ14524 2016 aa22.66■■□□□ 1.22
CDH11-203ENST00000562325 CXCL10P02778 98 aa22.66■■□□□ 1.22
CDH11-203ENST00000562325 SELPP16109 830 aa22.66■■□□□ 1.22
CDH11-203ENST00000562325 ARHGAP1Q07960 439 aa22.66■■□□□ 1.22
CDH11-203ENST00000562325 NMIQ13287 307 aaPredicted RBP22.66■■□□□ 1.22
CDH11-203ENST00000562325 DGKDQ16760 1214 aa22.66■■□□□ 1.22
CDH11-203ENST00000562325 ASPRV1Q53RT3 343 aa22.66■■□□□ 1.22
CDH11-203ENST00000562325 TBC1D10CQ8IV04 446 aa22.66■■□□□ 1.22
CDH11-203ENST00000562325 SYTL5Q8TDW5 730 aaPredicted RBP22.66■■□□□ 1.22
CDH11-203ENST00000562325 AFG1LQ8WV93 481 aa22.66■■□□□ 1.22
CDH11-203ENST00000562325 CTAGE1Q96RT6 745 aa22.66■■□□□ 1.22
CDH11-203ENST00000562325 ARIH1Q9Y4X5 557 aaPredicted RBP22.66■■□□□ 1.22
CDH11-203ENST00000562325 TLL1O43897 1013 aa22.65■■□□□ 1.22
CDH11-203ENST00000562325 HAND2P61296 217 aa22.65■■□□□ 1.22
CDH11-203ENST00000562325 TFF2Q03403 129 aa22.65■■□□□ 1.22
CDH11-203ENST00000562325 AAMPQ13685 434 aa22.65■■□□□ 1.22
CDH11-203ENST00000562325 CDC37Q16543 378 aaPredicted RBP22.65■■□□□ 1.22
CDH11-203ENST00000562325 USH1GQ495M9 461 aa22.65■■□□□ 1.22
CDH11-203ENST00000562325 CNKSR3Q6P9H4 555 aa22.65■■□□□ 1.22
CDH11-203ENST00000562325 LRRC8DQ7L1W4 858 aa22.65■■□□□ 1.22
CDH11-203ENST00000562325 PNMA1Q8ND90 353 aa22.65■■□□□ 1.22
CDH11-203ENST00000562325 MRPL11Q9Y3B7 192 aaKnown RBP22.65■■□□□ 1.22
CDH11-203ENST00000562325 ABHD14A-ACY1A0A1B0GW23 586 aa22.64■■□□□ 1.21
CDH11-203ENST00000562325 ZNF213O14771 459 aa22.64■■□□□ 1.21
CDH11-203ENST00000562325 EIF3JO75822 258 aaKnown RBP22.64■■□□□ 1.21
CDH11-203ENST00000562325 WDR5P61964 334 aaKnown RBP22.64■■□□□ 1.21
CDH11-203ENST00000562325 ARNTL2Q8WYA1 636 aa22.64■■□□□ 1.21
CDH11-203ENST00000562325 KAT2BQ92831 832 aa22.64■■□□□ 1.21
CDH11-203ENST00000562325 HLA-CQ95604 372 aa22.64■■□□□ 1.21
CDH11-203ENST00000562325 RMDN3Q96TC7 470 aa22.64■■□□□ 1.21
CDH11-203ENST00000562325 MAP3K20Q9NYL2 800 aaKnown RBP22.64■■□□□ 1.21
CDH11-203ENST00000562325 GTF2IRD1Q9UHL9 959 aa22.64■■□□□ 1.21
CDH11-203ENST00000562325 REV3LO60673 3130 aa22.64■■□□□ 1.21
CDH11-203ENST00000562325 EPOPA6NHQ4 379 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms