RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 DEFB103AP81534 67 aa23.77■■□□□ 1.4
PDXDC1-207ENST00000562119 PPP2R5BQ15173 497 aa23.77■■□□□ 1.4
PDXDC1-207ENST00000562119 NACAP1Q9BZK3 213 aa23.77■■□□□ 1.4
PDXDC1-207ENST00000562119 SUGCTQ9HAC7 445 aa23.77■■□□□ 1.4
PDXDC1-207ENST00000562119 MTUS1Q9ULD2 1270 aa23.77■■□□□ 1.4
PDXDC1-207ENST00000562119 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.77■■□□□ 1.4
PDXDC1-207ENST00000562119 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.76■■□□□ 1.39
PDXDC1-207ENST00000562119 KPNA6O60684 536 aa23.76■■□□□ 1.39
PDXDC1-207ENST00000562119 BRDTQ58F21 947 aaPredicted RBP23.76■■□□□ 1.39
PDXDC1-207ENST00000562119 CLEC4DQ8WXI8 215 aa23.76■■□□□ 1.39
PDXDC1-207ENST00000562119 NAPBQ9H115 298 aa23.76■■□□□ 1.39
PDXDC1-207ENST00000562119 UBE2ZQ9H832 354 aaPredicted RBP23.76■■□□□ 1.39
PDXDC1-207ENST00000562119 NOD1Q9Y239 953 aa23.76■■□□□ 1.39
PDXDC1-207ENST00000562119 TSPY2A6NKD2 308 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 PRR33A8MZF0 331 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 NKRFO15226 690 aaKnown RBP eCLIP23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 CALML3P27482 149 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 PTGISQ16647 500 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 CCDC96Q2M329 555 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 TCTN1Q2MV58 587 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 LRRFIP1Q32MZ4 808 aaKnown RBP23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 PPP4R3BQ5MIZ7 849 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 FAM178BQ8IXR5 827 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 SCFD2Q8WU76 684 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 RAD50Q92878 1312 aa23.75■■□□□ 1.39
PDXDC1-207ENST00000562119 ARIH2O95376 493 aa23.74■■□□□ 1.39
PDXDC1-207ENST00000562119 EDNRBP24530 442 aa23.74■■□□□ 1.39
PDXDC1-207ENST00000562119 NOVP48745 357 aa23.74■■□□□ 1.39
PDXDC1-207ENST00000562119 CHMP4BP1P59074 171 aa23.74■■□□□ 1.39
PDXDC1-207ENST00000562119 PDE4DQ08499 809 aa23.74■■□□□ 1.39
PDXDC1-207ENST00000562119 BTNL9Q6UXG8 535 aa23.74■■□□□ 1.39
PDXDC1-207ENST00000562119 GJD3Q8N144 294 aa23.74■■□□□ 1.39
PDXDC1-207ENST00000562119 AFAP1L1Q8TED9 768 aa23.74■■□□□ 1.39
PDXDC1-207ENST00000562119 ZBED2Q9BTP6 218 aa23.74■■□□□ 1.39
PDXDC1-207ENST00000562119 WDFY4Q6ZS81 3184 aa23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 FOXP2O15409 715 aa23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 ERVK-21P61565 698 aa23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 CTDSPL2Q05D32 466 aa23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 LEXMQ3ZCV2 418 aa23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 SYDE2Q5VT97 1194 aa23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 GDF6Q6KF10 455 aaPredicted RBP23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 CAGE1Q8TC20 777 aa23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 DCAF4Q8WV16 495 aa23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 DHX38Q92620 1227 aaKnown RBP23.73■■□□□ 1.39
PDXDC1-207ENST00000562119 GJB5O95377 273 aa23.72■■□□□ 1.39
PDXDC1-207ENST00000562119 TXNP10599 105 aaKnown RBP23.72■■□□□ 1.39
PDXDC1-207ENST00000562119 KCNA5P22460 613 aa23.72■■□□□ 1.39
PDXDC1-207ENST00000562119 RNF207Q6ZRF8 634 aa23.72■■□□□ 1.39
PDXDC1-207ENST00000562119 TGS1Q96RS0 853 aaKnown RBP23.72■■□□□ 1.39
PDXDC1-207ENST00000562119 LINC01553A4QN01 128 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 NBNO60934 754 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 CXCL10P02778 98 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 IL9P15248 144 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 SELPP16109 830 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 RPS6P62753 249 aaKnown RBP23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 CNKSR3Q6P9H4 555 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 LRRC8DQ7L1W4 858 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 CCDC155Q8N6L0 562 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 GPATCH3Q96I76 525 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 RAD9AQ99638 391 aa23.71■■□□□ 1.39
PDXDC1-207ENST00000562119 FRMPD2Q68DX3 1309 aaPredicted RBP23.7■■□□□ 1.38
PDXDC1-207ENST00000562119 SESTD1Q86VW0 696 aa23.7■■□□□ 1.38
PDXDC1-207ENST00000562119 RANBP6O60518 1105 aaKnown RBP23.69■■□□□ 1.38
PDXDC1-207ENST00000562119 SSTR3P32745 418 aaPredicted RBP23.69■■□□□ 1.38
PDXDC1-207ENST00000562119 RBL2Q08999 1139 aa23.69■■□□□ 1.38
PDXDC1-207ENST00000562119 ZMYM1Q5SVZ6 1142 aa23.69■■□□□ 1.38
PDXDC1-207ENST00000562119 AFG1LQ8WV93 481 aa23.69■■□□□ 1.38
PDXDC1-207ENST00000562119 KAT2BQ92831 832 aa23.69■■□□□ 1.38
PDXDC1-207ENST00000562119 GPCPD1Q9NPB8 672 aa23.69■■□□□ 1.38
PDXDC1-207ENST00000562119 TRIP12Q14669 1992 aaPredicted RBP23.69■■□□□ 1.38
PDXDC1-207ENST00000562119 CKBP12277 381 aa23.68■■□□□ 1.38
PDXDC1-207ENST00000562119 CCDC62Q6P9F0 684 aa23.68■■□□□ 1.38
PDXDC1-207ENST00000562119 DNERQ8NFT8 737 aa23.68■■□□□ 1.38
PDXDC1-207ENST00000562119 CHMP4BQ9H444 224 aaKnown RBP23.68■■□□□ 1.38
PDXDC1-207ENST00000562119 ABHD14A-ACY1A0A1B0GW23 586 aa23.67■■□□□ 1.38
PDXDC1-207ENST00000562119 MMP3P08254 477 aa23.67■■□□□ 1.38
PDXDC1-207ENST00000562119 MRE11P49959 708 aa23.67■■□□□ 1.38
PDXDC1-207ENST00000562119 PTCRAQ6ISU1 281 aaPredicted RBP23.67■■□□□ 1.38
PDXDC1-207ENST00000562119 FAM117BQ6P1L5 589 aa23.67■■□□□ 1.38
PDXDC1-207ENST00000562119 UIMC1Q96RL1 719 aa23.67■■□□□ 1.38
PDXDC1-207ENST00000562119 MPHOSPH6Q99547 160 aaKnown RBP23.67■■□□□ 1.38
PDXDC1-207ENST00000562119 GRXCR2A6NFK2 248 aa23.66■■□□□ 1.38
PDXDC1-207ENST00000562119 PARNO95453 639 aaKnown RBP23.66■■□□□ 1.38
PDXDC1-207ENST00000562119 TMEM47Q9BQJ4 181 aa23.66■■□□□ 1.38
PDXDC1-207ENST00000562119 C17orf80Q9BSJ5 609 aa23.66■■□□□ 1.38
PDXDC1-207ENST00000562119 ALADP13716 330 aa23.65■■□□□ 1.38
PDXDC1-207ENST00000562119 ARHGAP1Q07960 439 aa23.65■■□□□ 1.38
PDXDC1-207ENST00000562119 LY6KQ17RY6 165 aa23.65■■□□□ 1.38
PDXDC1-207ENST00000562119 TRAF7Q6Q0C0 670 aa23.65■■□□□ 1.38
PDXDC1-207ENST00000562119 FSD1Q9BTV5 496 aa23.65■■□□□ 1.38
PDXDC1-207ENST00000562119 GTF2IRD1Q9UHL9 959 aa23.65■■□□□ 1.38
PDXDC1-207ENST00000562119 ANAPC4Q9UJX5 808 aa23.65■■□□□ 1.38
PDXDC1-207ENST00000562119 ORC4O43929 436 aa23.64■■□□□ 1.37
PDXDC1-207ENST00000562119 PDHBP11177 359 aa23.64■■□□□ 1.37
PDXDC1-207ENST00000562119 TOP1P11387 765 aaKnown RBP23.64■■□□□ 1.37
PDXDC1-207ENST00000562119 IKBKEQ14164 716 aa23.64■■□□□ 1.37
PDXDC1-207ENST00000562119 MBTPS1Q14703 1052 aa23.64■■□□□ 1.37
PDXDC1-207ENST00000562119 PI4K2BQ8TCG2 481 aa23.64■■□□□ 1.37
PDXDC1-207ENST00000562119 NEK9Q8TD19 979 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms