RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 GRIA2P42262 883 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 GFRA1P56159 465 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 ZC3H6P61129 1189 aaKnown RBP3.8□□□□□ -1.8
CHD9-204ENST00000561869 ZNF200P98182 395 aaPredicted RBP3.8□□□□□ -1.8
CHD9-204ENST00000561869 DDR2Q16832 855 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 NAALADL2Q58DX5 795 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 EEPD1Q7L9B9 569 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 FAM129CQ86XR2 697 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 LZTR1Q8N653 840 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 PPP1R14AQ96A00 147 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 TSPAN17Q96FV3 270 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 C1orf159Q96HA4 380 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 EPN3Q9H201 632 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 RXFP1Q9HBX9 757 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.8□□□□□ -1.8
CHD9-204ENST00000561869 IRAK3Q9Y616 596 aa3.8□□□□□ -1.8
CHD9-204ENST00000561869 A0A1W2PQJ5 194 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 A0A1W2PQU0 124 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 NPHS1O60500 1241 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 BUB1BO60566 1050 aaPredicted RBP3.79□□□□□ -1.8
CHD9-204ENST00000561869 ATF2P15336 505 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 ECI1P42126 302 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 RAB33AQ14088 237 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 ZNF385BQ569K4 471 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 SLC35F1Q5T1Q4 408 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 ACBD5Q5T8D3 534 aaPredicted RBP3.79□□□□□ -1.8
CHD9-204ENST00000561869 Q8N1Y9 231 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 NETO2Q8NC67 525 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 CCDC140Q96MF4 163 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 PARD6AQ9NPB6 346 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 LRP2BPQ9P2M1 347 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 ADAMTS20P59510 1910 aa3.79□□□□□ -1.8
CHD9-204ENST00000561869 FUCA1P04066 466 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 ASGR2P07307 311 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 SNRPB2P08579 225 aaKnown RBP3.78□□□□□ -1.8
CHD9-204ENST00000561869 BMP7P18075 431 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 PPP2R2AP63151 447 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 PRSS53Q2L4Q9 553 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 E4F1Q66K89 784 aaPredicted RBP3.78□□□□□ -1.8
CHD9-204ENST00000561869 WWC2Q6AWC2 1192 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 IQCEQ6IPM2 695 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 NLRP10Q86W26 655 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 TMEM145Q8NBT3 493 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 KCNC2Q96PR1 638 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 BCAS3Q9H6U6 928 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 FBXL7Q9UJT9 491 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 MSRB2Q9Y3D2 182 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 NPFFR2Q9Y5X5 522 aa3.78□□□□□ -1.8
CHD9-204ENST00000561869 RFXAPO00287 272 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 DLX3O60479 287 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 TRIM13O60858 407 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 CPP00450 1065 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 NTRK1P04629 796 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 LCP1P13796 627 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 PMLP29590 882 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 LIMS1P48059 325 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 KRTAP10-2P60368 255 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 TARBP2Q15633 366 aaKnown RBP3.77□□□□□ -1.81
CHD9-204ENST00000561869 TCERG1LQ5VWI1 586 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 CNKSR3Q6P9H4 555 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 TEX2Q8IWB9 1127 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 TP53I13Q8NBR0 393 aaPredicted RBP3.77□□□□□ -1.81
CHD9-204ENST00000561869 RCBTB1Q8NDN9 531 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 DIO2Q92813 273 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 PEX11GQ96HA9 241 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 SGSM3Q96HU1 749 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 C8orf37Q96NL8 207 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 RNF38Q9H0F5 515 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 CDIP1Q9H305 208 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 MARCH2Q9P0N8 246 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 SIT1Q9Y3P8 196 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 R3HCC1Q9Y3T6 440 aaKnown RBP3.77□□□□□ -1.81
CHD9-204ENST00000561869 TIMM13Q9Y5L4 95 aaPredicted RBP3.77□□□□□ -1.81
CHD9-204ENST00000561869 X6R8D5 127 aa3.77□□□□□ -1.81
CHD9-204ENST00000561869 C22orf46C9J442 243 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 MEFVO15553 781 aaPredicted RBP3.76□□□□□ -1.81
CHD9-204ENST00000561869 SGSM2O43147 1006 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 PLA2G1BP04054 148 aaKnown RBP3.76□□□□□ -1.81
CHD9-204ENST00000561869 NCAM1P13591 858 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 PFKLP17858 780 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 FPR2P25090 351 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 BCL6P41182 706 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 MC3RP41968 323 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 AFF3P51826 1226 aaKnown RBP3.76□□□□□ -1.81
CHD9-204ENST00000561869 RPL11P62913 178 aaKnown RBP3.76□□□□□ -1.81
CHD9-204ENST00000561869 HTRA3P83110 453 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 FOXO4P98177 505 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 CAP1Q01518 475 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 DLX2Q07687 328 aaPredicted RBP3.76□□□□□ -1.81
CHD9-204ENST00000561869 MAP4K2Q12851 820 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 KCNAB2Q13303 367 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 SLC9A5Q14940 896 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 CABP7Q86V35 215 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 RIOX2Q8IUF8 465 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 TMEM151BQ8IW70 566 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 PPIL6Q8IXY8 311 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 MARCH10Q8NA82 808 aaPredicted RBP3.76□□□□□ -1.81
CHD9-204ENST00000561869 ST13P5Q8NFI4 369 aaPredicted RBP3.76□□□□□ -1.81
CHD9-204ENST00000561869 USP33Q8TEY7 942 aa3.76□□□□□ -1.81
CHD9-204ENST00000561869 CPA5Q8WXQ8 436 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms