RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CKAP2LQ8IYA6 745 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 ELOA2Q8IYF1 753 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-210ENST00000561817 ZNF713Q8N859 430 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-210ENST00000561817 JMYQ8N9B5 988 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 CCDC148Q8NFR7 591 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 RASGRP4Q8TDF6 673 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 ACER1Q8TDN7 264 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 PDLIM2Q96JY6 352 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 TIGD1Q96MW7 591 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 PPP1R9BQ96SB3 815 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 TNMDQ9H2S6 317 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 RRAGCQ9HB90 399 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 VEZTQ9HBM0 779 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 BRMS1Q9HCU9 246 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 CNOT7Q9UIV1 285 aaKnown RBP7.46□□□□□ -1.22
CAPN3-210ENST00000561817 ZBTB21Q9ULJ3 1066 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 TMX2Q9Y320 296 aa7.46□□□□□ -1.22
CAPN3-210ENST00000561817 FCF1Q9Y324 198 aaKnown RBP7.46□□□□□ -1.22
CAPN3-210ENST00000561817 SMCO2A6NFE2 343 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 BMP15O95972 392 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 SLC16A2P36021 539 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 CAP2P40123 477 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 CLK2P49760 499 aaKnown RBP7.45□□□□□ -1.22
CAPN3-210ENST00000561817 MDM2Q00987 491 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-210ENST00000561817 ZNF174Q15697 407 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 UVSSAQ2YD98 709 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 BRICD5Q6PL45 260 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 USP49Q70CQ1 688 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 ZNF784Q8NCA9 323 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-210ENST00000561817 COA7Q96BR5 231 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 CSRNP2Q9H175 543 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 PRDM16Q9HAZ2 1276 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 VAT1LQ9HCJ6 419 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 NOL7Q9UMY1 257 aaKnown RBP7.45□□□□□ -1.22
CAPN3-210ENST00000561817 CEP131Q9UPN4 1083 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 UTRNP46939 3433 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 ZC3H4Q9UPT8 1303 aaKnown RBP7.45□□□□□ -1.22
CAPN3-210ENST00000561817 ATAD5Q96QE3 1844 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 TRPM7Q96QT4 1865 aa7.45□□□□□ -1.22
CAPN3-210ENST00000561817 A0A087X0B3 334 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 GLTPD2A6NH11 291 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 ZBTB5O15062 677 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 AP5Z1O43299 807 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 MYO1BO43795 1136 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 PLA2G6O60733 806 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 KINO60870 393 aaKnown RBP7.44□□□□□ -1.22
CAPN3-210ENST00000561817 CCDC192P0DO97 292 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 ATP2B1P20020 1258 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 ECE1P42892 770 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 SLC1A4P43007 532 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 SYKP43405 635 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 HIRAP54198 1017 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-210ENST00000561817 NAPAP54920 295 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 ATP2B2Q01814 1243 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 FOXC1Q12948 553 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 MAP2K5Q13163 448 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 CCDC96Q2M329 555 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 QRICH1Q2TAL8 776 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 KIF4BQ2VIQ3 1234 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 LONRF3Q496Y0 759 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 TBC1D10BQ4KMP7 808 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-210ENST00000561817 MIGA2Q7L4E1 593 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 KRT25Q7Z3Z0 450 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 SH3RF1Q7Z6J0 888 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 HOMER1Q86YM7 354 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 FAM160A2Q8N612 972 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-210ENST00000561817 RNF214Q8ND24 703 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 TRPM4Q8TD43 1214 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 CCDC12Q8WUD4 166 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-210ENST00000561817 FERMT2Q96AC1 680 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 NUP88Q99567 741 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-210ENST00000561817 TRIM34Q9BYJ4 488 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 TMEM60Q9H2L4 133 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 C6orf50Q9HD87 102 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 RIC8AQ9NPQ8 531 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 GPRC5DQ9NZD1 345 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-210ENST00000561817 SEC63Q9UGP8 760 aaKnown RBP7.44□□□□□ -1.22
CAPN3-210ENST00000561817 HACL1Q9UJ83 578 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 TUBE1Q9UJT0 475 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 ZNF112Q9UJU3 913 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 KCNH3Q9ULD8 1083 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 SCAF8Q9UPN6 1271 aaKnown RBP7.44□□□□□ -1.22
CAPN3-210ENST00000561817 SSC5DA1L4H1 1573 aa7.44□□□□□ -1.22
CAPN3-210ENST00000561817 OPLAHO14841 1288 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 BMP3P12645 472 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 GNA11P29992 359 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 TNNI2P48788 182 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 IQCB1Q15051 598 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 INF2Q27J81 1249 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 SPECC1Q5M775 1068 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 SYDE2Q5VT97 1194 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 ARL6IP4Q66PJ3 421 aaKnown RBP7.43□□□□□ -1.22
CAPN3-210ENST00000561817 KRBA2Q6ZNG9 492 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 C11orf57Q6ZUT1 292 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-210ENST00000561817 GPC2Q8N158 579 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 FAM200AQ8TCP9 573 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 CRYGNQ8WXF5 182 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 DRC1Q96MC2 740 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 PCMTD1Q96MG8 357 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms