RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 WDR59Q6PJI9 974 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 POTEDQ86YR6 584 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 C7orf25Q9BPX7 421 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 NOC4LQ9BVI4 516 aaKnown RBP12.22□□□□□ -0.45
NEIL1-202ENST00000561643 SUGCTQ9HAC7 445 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 AGPAT5Q9NUQ2 364 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 TFR2Q9UP52 801 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 NAV1Q8NEY1 1877 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 USP17L5A8MUK1 530 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 ENC1O14682 589 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 CYLC1P35663 651 aaPredicted RBP12.22□□□□□ -0.45
NEIL1-202ENST00000561643 KLK7P49862 253 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 CNNM4Q6P4Q7 775 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 RNF217Q8TC41 542 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 NUP58Q9BVL2 599 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 TMEM260Q9NX78 707 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 GGA1Q9UJY5 639 aa12.22□□□□□ -0.45
NEIL1-202ENST00000561643 CORO7P57737 925 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 HERVK_113P62684 666 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 FAM196AQ6ZSG2 479 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 HNRNPLLQ8WVV9 542 aaKnown RBP12.21□□□□□ -0.45
NEIL1-202ENST00000561643 HPS3Q969F9 1004 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 CDK5RAP3Q96JB5 506 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 RAB21Q9UL25 225 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 FRMPD2Q68DX3 1309 aaPredicted RBP12.21□□□□□ -0.45
NEIL1-202ENST00000561643 PPP1R2P41236 205 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 AMPD2Q01433 879 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 BEND6Q5SZJ8 279 aaPredicted RBP12.21□□□□□ -0.45
NEIL1-202ENST00000561643 FKBP15Q5T1M5 1219 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 C15orf52Q6ZUT6 534 aaKnown RBP12.21□□□□□ -0.45
NEIL1-202ENST00000561643 HDXQ7Z353 690 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 ABCB6Q9NP58 842 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 SLC39A2Q9NP94 309 aa12.21□□□□□ -0.45
NEIL1-202ENST00000561643 KRT86O43790 486 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 ATP2B4P23634 1241 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 CALCRLQ16602 461 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 PRR5LQ6MZQ0 368 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 SV2BQ7L1I2 683 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 SLF2Q8IX21 1173 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 RETREG2Q8NC44 543 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 NOA1Q8NC60 698 aaKnown RBP12.21□□□□□ -0.46
NEIL1-202ENST00000561643 JAKMIP2Q96AA8 810 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 CXorf56Q9H5V9 222 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 HDAC6Q9UBN7 1215 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 LRWD1Q9UFC0 647 aa12.21□□□□□ -0.46
NEIL1-202ENST00000561643 PSMD14O00487 310 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 VSNL1P62760 191 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 ZBED6P86452 979 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 MMTAG2Q9BU76 263 aaKnown RBP12.2□□□□□ -0.46
NEIL1-202ENST00000561643 MAP2K7O14733 419 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 RHBDL3P58872 404 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 MEA1Q16626 185 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 TMEM266Q2M3C6 531 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 LRRC31Q6UY01 552 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 MICALL1Q8N3F8 863 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 EHBP1Q8NDI1 1231 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 COA7Q96BR5 231 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 TTYH3Q9C0H2 523 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 GBP3Q9H0R5 595 aa12.2□□□□□ -0.46
NEIL1-202ENST00000561643 NHEJ1Q9H9Q4 299 aaPredicted RBP12.2□□□□□ -0.46
NEIL1-202ENST00000561643 SMARCA1P28370 1054 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
NEIL1-202ENST00000561643 PICALMQ13492 652 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 MCTP2Q6DN12 878 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 TRAPPC11Q7Z392 1133 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
NEIL1-202ENST00000561643 KIAA0895Q8NCT3 520 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 SAR1BQ9Y6B6 198 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 SBF2Q86WG5 1849 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 BTAF1O14981 1849 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 ATP1A1P05023 1023 aaKnown RBP12.19□□□□□ -0.46
NEIL1-202ENST00000561643 PDHBP11177 359 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 IL1R1P14778 569 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 ADCY7P51828 1080 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 CCDC91Q7Z6B0 441 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 ESYT2A0FGR8 921 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 C6orf229H3BNL8 230 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 EIF3JO75822 258 aaKnown RBP12.19□□□□□ -0.46
NEIL1-202ENST00000561643 ORC2Q13416 577 aaPredicted RBP12.19□□□□□ -0.46
NEIL1-202ENST00000561643 MIIPQ5JXC2 388 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 CCDC170Q8IYT3 715 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 CAPZA3Q96KX2 299 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 SEMA6BQ9H3T3 888 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 RIOX1Q9H6W3 641 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 SUFUQ9UMX1 484 aa12.19□□□□□ -0.46
NEIL1-202ENST00000561643 RASSF10A6NK89 507 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 SRGAP2O75044 1071 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 TDP2O95551 362 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 TUBBP07437 444 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 IDEP14735 1019 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 CYP27A1Q02318 531 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 GRB10Q13322 594 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 MMS22LQ6ZRQ5 1243 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 CNKSR2Q8WXI2 1034 aa12.18□□□□□ -0.46
NEIL1-202ENST00000561643 LARP4BQ92615 738 aaKnown RBP12.18□□□□□ -0.46
NEIL1-202ENST00000561643 RBM17Q96I25 401 aaKnown RBP12.18□□□□□ -0.46
NEIL1-202ENST00000561643 RAB34Q9BZG1 259 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms