RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 PKN1Q16512 942 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 CCSAPQ6IQ19 270 aaPredicted RBP16.06■□□□□ 0.16
TPM1-230ENST00000561266 NECAB2Q7Z6G3 386 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 FCHSD1Q86WN1 690 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 KLHDC9Q8NEP7 349 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 PHKBQ93100 1093 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 C11orf49Q9H6J7 331 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 TPCN1Q9ULQ1 816 aa16.06■□□□□ 0.16
TPM1-230ENST00000561266 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 RBM47A0AV96 593 aaKnown RBP16.05■□□□□ 0.16
TPM1-230ENST00000561266 DUSP11O75319 330 aaKnown RBP16.05■□□□□ 0.16
TPM1-230ENST00000561266 LARGE1O95461 756 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 RARBP10826 455 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 AK2P54819 239 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 TNFAIP2Q03169 654 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 STK3Q13188 491 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 UBE2SQ16763 222 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 COPS5Q92905 334 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 PDCD2LQ9BRP1 358 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 SENP6Q9GZR1 1112 aaPredicted RBP16.05■□□□□ 0.16
TPM1-230ENST00000561266 MAF1Q9H063 256 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
TPM1-230ENST00000561266 SEC63Q9UGP8 760 aaKnown RBP16.05■□□□□ 0.16
TPM1-230ENST00000561266 CEP290O15078 2479 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 GCOM1H8Y6P7 765 aaPredicted RBP16.04■□□□□ 0.16
TPM1-230ENST00000561266 STXBP3O00186 592 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 DNM1LO00429 736 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 RGS20O76081 388 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 NR3C2P08235 984 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 POLR2MP0CAP2 368 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 BEX3Q00994 111 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 PDE4DQ08499 809 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 LRRC26Q2I0M4 334 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 HEATR3Q7Z4Q2 680 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 NSUN6Q8TEA1 469 aaKnown RBP16.04■□□□□ 0.16
TPM1-230ENST00000561266 FERMT2Q96AC1 680 aa16.04■□□□□ 0.16
TPM1-230ENST00000561266 ZNF274Q96GC6 653 aaPredicted RBP16.04■□□□□ 0.16
TPM1-230ENST00000561266 UPF3AQ9H1J1 476 aaKnown RBP16.04■□□□□ 0.16
TPM1-230ENST00000561266 ALDH8A1Q9H2A2 487 aaPredicted RBP16.04■□□□□ 0.16
TPM1-230ENST00000561266 LOC102724159A0A0B4J2E5 919 aa16.03■□□□□ 0.16
TPM1-230ENST00000561266 CAPN2P17655 700 aa16.03■□□□□ 0.16
TPM1-230ENST00000561266 GJA9P57773 515 aa16.03■□□□□ 0.16
TPM1-230ENST00000561266 PGM5Q15124 567 aa16.03■□□□□ 0.16
TPM1-230ENST00000561266 PWP2Q15269 919 aaKnown RBP16.03■□□□□ 0.16
TPM1-230ENST00000561266 ARHGEF16Q5VV41 709 aa16.03■□□□□ 0.16
TPM1-230ENST00000561266 IQSEC1Q6DN90 963 aa16.03■□□□□ 0.16
TPM1-230ENST00000561266 NOL8Q76FK4 1167 aaKnown RBP16.03■□□□□ 0.16
TPM1-230ENST00000561266 ARRDC4Q8NCT1 418 aa16.03■□□□□ 0.16
TPM1-230ENST00000561266 WDR11Q9BZH6 1224 aa16.03■□□□□ 0.16
TPM1-230ENST00000561266 FRMPD4Q14CM0 1322 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 DYNC1LI2O43237 492 aaPredicted RBP16.02■□□□□ 0.16
TPM1-230ENST00000561266 PRPF3O43395 683 aaKnown RBP16.02■□□□□ 0.16
TPM1-230ENST00000561266 MYCLP12524 364 aaPredicted RBP16.02■□□□□ 0.16
TPM1-230ENST00000561266 IFNAR1P17181 557 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 ATN1P54259 1190 aaPredicted RBP16.02■□□□□ 0.16
TPM1-230ENST00000561266 NKX3-2P78367 333 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 MRPS9P82933 396 aaKnown RBP16.02■□□□□ 0.16
TPM1-230ENST00000561266 SCRN1Q12765 414 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 KCNA10Q16322 511 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 PFKFB3Q16875 520 aaPredicted RBP16.02■□□□□ 0.16
TPM1-230ENST00000561266 CCDC62Q6P9F0 684 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 SEPT14Q6ZU15 432 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 VSIG10LQ86VR7 867 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 SAMD3Q8N6K7 520 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 DPF3Q92784 378 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 IWS1Q96ST2 819 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 BCAS3Q9H6U6 928 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 PSTPIP2Q9H939 334 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 MAP3K20Q9NYL2 800 aaKnown RBP16.02■□□□□ 0.16
TPM1-230ENST00000561266 PHF24Q9UPV7 400 aa16.02■□□□□ 0.16
TPM1-230ENST00000561266 PIK3CDO00329 1044 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 CTDNEP1O95476 244 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 C6orf222P0C671 652 aaPredicted RBP16.01■□□□□ 0.15
TPM1-230ENST00000561266 NEK4P51957 841 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 ST3GAL1Q11201 340 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 TRAF1Q13077 416 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 PPP2R5BQ15173 497 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 STXBP2Q15833 593 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 LY6KQ17RY6 165 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 DUSP28Q4G0W2 176 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 TLK2Q86UE8 772 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 PGBD1Q96JS3 809 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 AIFM3Q96NN9 605 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 SLC26A6Q9BXS9 759 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 TMEM260Q9NX78 707 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 BARHL2Q9NY43 387 aa16.01■□□□□ 0.15
TPM1-230ENST00000561266 CCDC196A0A1B0GTZ2 297 aa16■□□□□ 0.15
TPM1-230ENST00000561266 KBTBD13C9JR72 458 aa16■□□□□ 0.15
TPM1-230ENST00000561266 SCG2P13521 617 aa16■□□□□ 0.15
TPM1-230ENST00000561266 CST5P28325 142 aaPredicted RBP16■□□□□ 0.15
TPM1-230ENST00000561266 ACLYP53396 1101 aa16■□□□□ 0.15
TPM1-230ENST00000561266 NAPAP54920 295 aa16■□□□□ 0.15
TPM1-230ENST00000561266 SEMA3FQ13275 785 aa16■□□□□ 0.15
TPM1-230ENST00000561266 ME3Q16798 604 aa16■□□□□ 0.15
TPM1-230ENST00000561266 SLC39A5Q6ZMH5 540 aa16■□□□□ 0.15
TPM1-230ENST00000561266 NECAB1Q8N987 351 aa16■□□□□ 0.15
TPM1-230ENST00000561266 SMARCC2Q8TAQ2 1214 aa16■□□□□ 0.15
TPM1-230ENST00000561266 C22orf23Q9BZE7 217 aa16■□□□□ 0.15
TPM1-230ENST00000561266 A0A1W2PQ45 241 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms