RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 MRPL11Q9Y3B7 192 aaKnown RBP14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 PCDHA1Q9Y5I3 950 aa14.71□□□□□ -0.05
CHRNA3-208ENST00000561128 A0A1W2PPC1 479 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 KIAA0355O15063 1070 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 EXOSC10Q01780 885 aaKnown RBP14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 CASC1Q6TDU7 716 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 SLC43A3Q8NBI5 491 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 OR6J1Q8NGC5 347 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 TMEM87BQ96K49 555 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 GLT1D1Q96MS3 346 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 RMDN3Q96TC7 470 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 SPZ1Q9BXG8 430 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 PNMA2Q9UL42 364 aa14.7□□□□□ -0.06
CHRNA3-208ENST00000561128 LAMA3Q16787 3333 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 ELP1O95163 1332 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 SCN10AQ9Y5Y9 1956 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 LOC102724159A0A0B4J2E5 919 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 A0A0U1RQG5 324 aaPredicted RBP14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 ARVCFO00192 962 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 SORBS3O60504 671 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 ARHGAP1Q07960 439 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 PPP2R5BQ15173 497 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 PWP2Q15269 919 aaKnown RBP14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 SHHQ15465 462 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 LY6KQ17RY6 165 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 APOA5Q6Q788 366 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 NFXL1Q6ZNB6 911 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 SEPT14Q6ZU15 432 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 MICU3Q86XE3 530 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 PCSK9Q8NBP7 692 aaKnown RBP14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 KCNB2Q92953 911 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 PDCD2LQ9BRP1 358 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 AP5M1Q9H0R1 490 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 SPC25Q9HBM1 224 aa14.69□□□□□ -0.06
CHRNA3-208ENST00000561128 CNTNAP5Q8WYK1 1306 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 SZT2Q5T011 3432 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 DOCK5Q9H7D0 1870 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 PNMA6FA0A0J9YX94 578 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 CD4P01730 458 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 LIFRP42702 1097 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 PURAQ00577 322 aaKnown RBP14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 TMTC3Q6ZXV5 915 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 Q7L0L9 218 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 SGMS1Q86VZ5 419 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 NSUN6Q8TEA1 469 aaKnown RBP14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 SCFD2Q8WU76 684 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 NEK1Q96PY6 1258 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 MAP3K14Q99558 947 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 LBHD1Q9BQE6 289 aaPredicted RBP14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 MTA3Q9BTC8 594 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 TRPV6Q9H1D0 765 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 BCAS3Q9H6U6 928 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 FAM217BQ9NTX9 383 aaPredicted RBP14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 Q9Y3F1 56 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 TELO2Q9Y4R8 837 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 SNX14Q9Y5W7 946 aa14.68□□□□□ -0.06
CHRNA3-208ENST00000561128 FRMPD4Q14CM0 1322 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 CCDC69A6NI79 296 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 B4GALT4O60513 344 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 NR3C2P08235 984 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 MYL3P08590 195 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 TXNP10599 105 aaKnown RBP14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 FUT2Q10981 343 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 ITGA7Q13683 1181 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 PGM5Q15124 567 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 TSGA10IPQ3SY00 556 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 ARHGEF16Q5VV41 709 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 TYW1BQ6NUM6 668 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 FCHSD1Q86WN1 690 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 MCF2L2Q86YR7 1114 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 CCDC82Q8N4S0 544 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 CTCFLQ8NI51 663 aaPredicted RBP14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 AFG1LQ8WV93 481 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 VTI1AQ96AJ9 217 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 VWCEQ96DN2 955 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 TOX2Q96NM4 488 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 PPP1R12CQ9BZL4 782 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 TMEM39AQ9NV64 488 aa14.67□□□□□ -0.06
CHRNA3-208ENST00000561128 ADAMTS3O15072 1205 aa14.66□□□□□ -0.06
CHRNA3-208ENST00000561128 MYCLP12524 364 aaPredicted RBP14.66□□□□□ -0.06
CHRNA3-208ENST00000561128 CDC27P30260 824 aa14.66□□□□□ -0.06
CHRNA3-208ENST00000561128 HSPA4P34932 840 aa14.66□□□□□ -0.06
CHRNA3-208ENST00000561128 SP2Q02086 613 aa14.66□□□□□ -0.06
CHRNA3-208ENST00000561128 SEMA3FQ13275 785 aa14.66□□□□□ -0.06
CHRNA3-208ENST00000561128 LRIT3Q3SXY7 679 aa14.66□□□□□ -0.06
CHRNA3-208ENST00000561128 USP17L6PQ6QN14 398 aa14.66□□□□□ -0.06
CHRNA3-208ENST00000561128 PRKAG2Q9UGJ0 569 aa14.66□□□□□ -0.06
CHRNA3-208ENST00000561128 TANC1Q9C0D5 1861 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 A6NJR5 290 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 DCDC2CA8MYV0 355 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 MEIS2O14770 477 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 NEFLP07196 543 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 MMP3P08254 477 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 RAG1P15918 1043 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 CYP2C18P33260 490 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 MRPS9P82933 396 aaKnown RBP14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 UBE2SQ16763 222 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 C16orf59Q7L2K0 433 aa14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 DHX32Q7L7V1 743 aaKnown RBP14.65□□□□□ -0.06
CHRNA3-208ENST00000561128 FANCBQ8NB91 859 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms