RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 TRPV6Q9H1D0 765 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 ALDH8A1Q9H2A2 487 aaPredicted RBP12.57□□□□□ -0.4
TPM1-227ENST00000560970 NKX2-4Q9H2Z4 354 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 SLC28A3Q9HAS3 691 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 PRDM6Q9NQX0 595 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 PNMA2Q9UL42 364 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 TNKSO95271 1327 aa12.57□□□□□ -0.4
TPM1-227ENST00000560970 PCP11498 1178 aaKnown RBP12.56□□□□□ -0.4
TPM1-227ENST00000560970 PURAQ00577 322 aaKnown RBP12.56□□□□□ -0.4
TPM1-227ENST00000560970 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
TPM1-227ENST00000560970 BAATQ14032 418 aaPredicted RBP12.56□□□□□ -0.4
TPM1-227ENST00000560970 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
TPM1-227ENST00000560970 IMMTQ16891 758 aaKnown RBP12.56□□□□□ -0.4
TPM1-227ENST00000560970 TMEM63BQ5T3F8 832 aa12.56□□□□□ -0.4
TPM1-227ENST00000560970 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
TPM1-227ENST00000560970 TTBK2Q6IQ55 1244 aa12.56□□□□□ -0.4
TPM1-227ENST00000560970 OR6J1Q8NGC5 347 aa12.56□□□□□ -0.4
TPM1-227ENST00000560970 ATXN2LQ8WWM7 1075 aaKnown RBP12.56□□□□□ -0.4
TPM1-227ENST00000560970 TMEM47Q9BQJ4 181 aa12.56□□□□□ -0.4
TPM1-227ENST00000560970 WDR11Q9BZH6 1224 aa12.56□□□□□ -0.4
TPM1-227ENST00000560970 YBX2Q9Y2T7 364 aaKnown RBP12.56□□□□□ -0.4
TPM1-227ENST00000560970 RALGAPA2Q2PPJ7 1873 aa12.56□□□□□ -0.4
TPM1-227ENST00000560970 BDP1A6H8Y1 2624 aa12.56□□□□□ -0.4
TPM1-227ENST00000560970 RBM47A0AV96 593 aaKnown RBP12.55□□□□□ -0.4
TPM1-227ENST00000560970 ZBBXA8MT70 800 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 B4E1Z4 1266 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 TNFRSF10AO00220 468 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 NKRFO15226 690 aaKnown RBP eCLIP12.55□□□□□ -0.41e-6■■□□□ 14
TPM1-227ENST00000560970 CDC45O75419 566 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 CYP21A2P08686 494 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 CALML3P27482 149 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 ZNF543Q08ER8 600 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 ADGRE1Q14246 886 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 BRDTQ58F21 947 aaPredicted RBP12.55□□□□□ -0.4
TPM1-227ENST00000560970 RNF207Q6ZRF8 634 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 MFSD6Q6ZSS7 791 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 RPUSD2Q8IZ73 545 aaKnown RBP12.55□□□□□ -0.4
TPM1-227ENST00000560970 CLEC4DQ8WXI8 215 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 SCLYQ96I15 445 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 MTG1Q9BT17 334 aaPredicted RBP12.55□□□□□ -0.4
TPM1-227ENST00000560970 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
TPM1-227ENST00000560970 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
TPM1-227ENST00000560970 CTNNA3Q9UI47 895 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 PCDHA11Q9Y5I1 949 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 RBM8AQ9Y5S9 174 aaKnown RBP12.55□□□□□ -0.4
TPM1-227ENST00000560970 SLC4A7Q9Y6M7 1214 aa12.55□□□□□ -0.4
TPM1-227ENST00000560970 NCOR1O75376 2440 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 ATG2AQ2TAZ0 1938 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 MYL3P08590 195 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 SNHG28P0DPA3 235 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
TPM1-227ENST00000560970 EDNRBP24530 442 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 RPS6P62753 249 aaKnown RBP12.54□□□□□ -0.4
TPM1-227ENST00000560970 PDE4DQ08499 809 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 STOX1Q6ZVD7 989 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 DNERQ8NFT8 737 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 SCFD2Q8WU76 684 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 MAP4K1Q92918 833 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 ZKSCAN3Q9BRR0 538 aa12.54□□□□□ -0.4
TPM1-227ENST00000560970 GPHNQ9NQX3 736 aaPredicted RBP12.54□□□□□ -0.4
TPM1-227ENST00000560970 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
TPM1-227ENST00000560970 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 KDM4AO75164 1064 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 CYP2C9P11712 490 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 IGFBP4P22692 258 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 RFC2P35250 354 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 RABGGTBP53611 331 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 COL9A3Q14050 684 aaPredicted RBP12.53□□□□□ -0.4
TPM1-227ENST00000560970 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 GPATCH4Q5T3I0 446 aaKnown RBP12.53□□□□□ -0.4
TPM1-227ENST00000560970 NFRKBQ6P4R8 1299 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 CYB5R4Q7L1T6 521 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 IL27Q8NEV9 243 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 ADAMTS19Q8TE59 1207 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 ESR2Q92731 530 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 VWCEQ96DN2 955 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 ASB2Q96Q27 587 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 SLC9A7Q96T83 725 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 ANO2Q9NQ90 1003 aa12.53□□□□□ -0.4
TPM1-227ENST00000560970 PRRC2BQ5JSZ5 2229 aaKnown RBP12.52□□□□□ -0.41
TPM1-227ENST00000560970 B4DLN1 442 aa12.52□□□□□ -0.41
TPM1-227ENST00000560970 KPNA6O60684 536 aa12.52□□□□□ -0.41
TPM1-227ENST00000560970 ACTN1P12814 892 aa12.52□□□□□ -0.41
TPM1-227ENST00000560970 NT5C2P49902 561 aa12.52□□□□□ -0.41
TPM1-227ENST00000560970 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
TPM1-227ENST00000560970 TTLL4Q14679 1199 aa12.52□□□□□ -0.41
TPM1-227ENST00000560970 TTC14Q96N46 770 aa12.52□□□□□ -0.41
TPM1-227ENST00000560970 A6NJR5 290 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 E7EWF7 191 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 SLC27A2O14975 620 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 MYOGP15173 224 aa12.51□□□□□ -0.41
TPM1-227ENST00000560970 MRPS5P82675 430 aaKnown RBP12.51□□□□□ -0.41
TPM1-227ENST00000560970 PTPN11Q06124 597 aaPredicted RBP12.51□□□□□ -0.41
TPM1-227ENST00000560970 CCDC85BQ15834 202 aaPredicted RBP12.51□□□□□ -0.41
TPM1-227ENST00000560970 CDC37Q16543 378 aaPredicted RBP12.51□□□□□ -0.41
TPM1-227ENST00000560970 NBPF20Q3BBV1 942 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms