RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 TMEM119Q4V9L6 283 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 DNTTIP2Q5QJE6 756 aaKnown RBP28.18■■■□□ 2.1
SHF-208ENST00000560734 RANBP17Q9H2T7 1088 aaKnown RBP28.18■■■□□ 2.1
SHF-208ENST00000560734 FEM1BQ9UK73 627 aa28.18■■■□□ 2.1
SHF-208ENST00000560734 CIITAP33076 1130 aa28.17■■■□□ 2.1
SHF-208ENST00000560734 ARMCX5Q6P1M9 558 aa28.17■■■□□ 2.1
SHF-208ENST00000560734 SV2BQ7L1I2 683 aa28.17■■■□□ 2.1
SHF-208ENST00000560734 APTXQ7Z2E3 356 aaKnown RBP28.17■■■□□ 2.1
SHF-208ENST00000560734 LRRC15Q8TF66 581 aa28.17■■■□□ 2.1
SHF-208ENST00000560734 INTS13Q9NVM9 706 aa28.17■■■□□ 2.1
SHF-208ENST00000560734 PCDHA12Q9UN75 941 aa28.17■■■□□ 2.1
SHF-208ENST00000560734 PVALEFA0A1B0GWK0 134 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 SPDYE3A6NKU9 549 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 PHF20L1A8MW92 1017 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 H7C1D1 291 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 CYP3A4P08684 503 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 ARHGAP4P98171 946 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 TBX2Q13207 712 aaPredicted RBP28.16■■■□□ 2.1
SHF-208ENST00000560734 RASA3Q14644 834 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 KLHL10Q6JEL2 608 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 DHTKD1Q96HY7 919 aaPredicted RBP28.16■■■□□ 2.1
SHF-208ENST00000560734 CDK5RAP3Q96JB5 506 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 TEPSINQ96N21 525 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 PNMA5Q96PV4 448 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 CTNND2Q9UQB3 1225 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 KDM3AQ9Y4C1 1321 aa28.16■■■□□ 2.1
SHF-208ENST00000560734 ARID5BQ14865 1188 aa28.15■■■□□ 2.1
SHF-208ENST00000560734 SMYD4Q8IYR2 804 aaPredicted RBP28.15■■■□□ 2.1
SHF-208ENST00000560734 NT5C3AQ9H0P0 336 aa28.15■■■□□ 2.1
SHF-208ENST00000560734 BCS1LQ9Y276 419 aa28.15■■■□□ 2.1
SHF-208ENST00000560734 PRCPP42785 496 aa28.15■■■□□ 2.1
SHF-208ENST00000560734 SPECC1LQ69YQ0 1117 aa28.15■■■□□ 2.1
SHF-208ENST00000560734 MYRIPQ8NFW9 859 aa28.15■■■□□ 2.1
SHF-208ENST00000560734 NELFBQ8WX92 580 aa28.15■■■□□ 2.1
SHF-208ENST00000560734 BLOC1S4Q9NUP1 217 aa28.15■■■□□ 2.1
SHF-208ENST00000560734 LIMA1Q9UHB6 759 aaKnown RBP28.15■■■□□ 2.1
SHF-208ENST00000560734 UQCRHLA0A096LP55 91 aa28.14■■■□□ 2.1
SHF-208ENST00000560734 MARCH6O60337 910 aa28.14■■■□□ 2.1
SHF-208ENST00000560734 UQCRHP07919 91 aa28.14■■■□□ 2.1
SHF-208ENST00000560734 TPD52L1Q16890 204 aaPredicted RBP28.14■■■□□ 2.1
SHF-208ENST00000560734 FILIP1LQ4L180 1135 aa28.14■■■□□ 2.1
SHF-208ENST00000560734 KIAA1755Q5JYT7 1200 aa28.14■■■□□ 2.1
SHF-208ENST00000560734 FAM83BQ5T0W9 1011 aa28.14■■■□□ 2.1
SHF-208ENST00000560734 MIGA2Q7L4E1 593 aa28.14■■■□□ 2.1
SHF-208ENST00000560734 SPICE1Q8N0Z3 855 aa28.14■■■□□ 2.1
SHF-208ENST00000560734 C17orf53Q8N3J3 647 aaPredicted RBP28.14■■■□□ 2.1
SHF-208ENST00000560734 NOC3LQ8WTT2 800 aaKnown RBP28.14■■■□□ 2.1
SHF-208ENST00000560734 LARP4BQ92615 738 aaKnown RBP28.14■■■□□ 2.1
SHF-208ENST00000560734 DEFB129Q9H1M3 183 aa28.14■■■□□ 2.1
SHF-208ENST00000560734 PSMA7O14818 248 aa28.13■■■□□ 2.09
SHF-208ENST00000560734 CDAN1Q8IWY9 1227 aa28.13■■■□□ 2.09
SHF-208ENST00000560734 ANKRD20A12PQ8NF67 263 aa28.13■■■□□ 2.09
SHF-208ENST00000560734 SNX29Q8TEQ0 813 aa28.13■■■□□ 2.09
SHF-208ENST00000560734 LPAR1Q92633 364 aa28.13■■■□□ 2.09
SHF-208ENST00000560734 RAD54LQ92698 747 aa28.13■■■□□ 2.09
SHF-208ENST00000560734 FAM20AQ96MK3 541 aa28.13■■■□□ 2.09
SHF-208ENST00000560734 PLIN2Q99541 437 aa28.13■■■□□ 2.09
SHF-208ENST00000560734 ADD3Q9UEY8 706 aaKnown RBP28.13■■■□□ 2.09
SHF-208ENST00000560734 OPLAHO14841 1288 aa28.12■■■□□ 2.09
SHF-208ENST00000560734 GTF2F1P35269 517 aaKnown RBP eCLIP28.12■■■□□ 2.09
SHF-208ENST00000560734 STX17P56962 302 aa28.12■■■□□ 2.09
SHF-208ENST00000560734 EXOC1Q9NV70 894 aa28.12■■■□□ 2.09
SHF-208ENST00000560734 CTNND1O60716 968 aaKnown RBP28.12■■■□□ 2.09
SHF-208ENST00000560734 PTGER2P43116 358 aa28.12■■■□□ 2.09
SHF-208ENST00000560734 GMPSP49915 693 aaPredicted RBP28.12■■■□□ 2.09
SHF-208ENST00000560734 USH1GQ495M9 461 aa28.12■■■□□ 2.09
SHF-208ENST00000560734 KCTD17Q8N5Z5 321 aa28.12■■■□□ 2.09
SHF-208ENST00000560734 HOOK2Q96ED9 719 aa28.12■■■□□ 2.09
SHF-208ENST00000560734 TMX1Q9H3N1 280 aa28.12■■■□□ 2.09
SHF-208ENST00000560734 GDAQ9Y2T3 454 aa28.12■■■□□ 2.09
SHF-208ENST00000560734 MRPL11Q9Y3B7 192 aaKnown RBP28.12■■■□□ 2.09
SHF-208ENST00000560734 POTEMA6NI47 508 aa28.11■■■□□ 2.09
SHF-208ENST00000560734 RRP9O43818 475 aaKnown RBP28.11■■■□□ 2.09
SHF-208ENST00000560734 MICALL2Q8IY33 904 aa28.11■■■□□ 2.09
SHF-208ENST00000560734 PPP1R1BQ9UD71 204 aaPredicted RBP28.11■■■□□ 2.09
SHF-208ENST00000560734 ABCB11O95342 1321 aa28.11■■■□□ 2.09
SHF-208ENST00000560734 ASIC1P78348 528 aa28.1■■■□□ 2.09
SHF-208ENST00000560734 UNC13DQ70J99 1090 aa28.1■■■□□ 2.09
SHF-208ENST00000560734 ETNPPLQ8TBG4 499 aa28.1■■■□□ 2.09
SHF-208ENST00000560734 THAP9Q9H5L6 903 aa28.1■■■□□ 2.09
SHF-208ENST00000560734 CNOT7Q9UIV1 285 aaKnown RBP28.1■■■□□ 2.09
SHF-208ENST00000560734 BICDL2A1A5D9 508 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 SNAP25P60880 206 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 PSMD2Q13200 908 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 FOXR2Q6PJQ5 311 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 P2RX7Q99572 595 aaKnown RBP28.09■■■□□ 2.09
SHF-208ENST00000560734 KIAA1683Q9H0B3 1180 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 EHMT1Q9H9B1 1298 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 SHTN1A0MZ66 631 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 WDR46O15213 610 aaKnown RBP28.09■■■□□ 2.09
SHF-208ENST00000560734 PBX1P40424 430 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 PDE4DQ08499 809 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 PNMA2Q9UL42 364 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 ITIH6Q6UXX5 1313 aa28.09■■■□□ 2.09
SHF-208ENST00000560734 ATAD5Q96QE3 1844 aa28.08■■■□□ 2.09
SHF-208ENST00000560734 EEF1GP26641 437 aaKnown RBP28.08■■■□□ 2.09
SHF-208ENST00000560734 SPON1Q9HCB6 807 aa28.08■■■□□ 2.09
SHF-208ENST00000560734 CCP110O43303 1012 aa28.07■■■□□ 2.08
SHF-208ENST00000560734 TCP11X2Q5H9J9 407 aa28.07■■■□□ 2.08
SHF-208ENST00000560734 HAUS3Q68CZ6 603 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms