RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 GMCL1Q96IK5 515 aa15.83■□□□□ 0.12
CARMIL3-203ENST00000560349 PNMA5Q96PV4 448 aa15.83■□□□□ 0.12
CARMIL3-203ENST00000560349 FAM177A1Q8N128 213 aaPredicted RBP15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 NLGN2Q8NFZ4 835 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 CYP2W1Q8TAV3 490 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 ANKRD7Q92527 254 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 CDK5RAP3Q96JB5 506 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 TRIM9Q9C026 710 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 IMPACTQ9P2X3 320 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 PSME4Q14997 1843 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 MYO1BO43795 1136 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 STAT2P52630 851 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 RAD51AP2Q09MP3 1159 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 TMEM266Q2M3C6 531 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 PRR16Q569H4 304 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 SMAP1Q8IYB5 467 aaPredicted RBP15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 AGBL3Q8NEM8 1001 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 AK8Q96MA6 479 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 PYM1Q9BRP8 204 aaKnown RBP15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 MTFR1LQ9H019 292 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 VPS16Q9H269 839 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 ARHGEF10LQ9HCE6 1279 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 BLOC1S4Q9NUP1 217 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 TAB2Q9NYJ8 693 aa15.82■□□□□ 0.12
CARMIL3-203ENST00000560349 SSBP05455 408 aaKnown RBP eCLIP15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 TNNT1P13805 278 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 TGFB2P61812 414 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 PDE4DQ08499 809 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 STK4Q13043 487 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 CEP135Q66GS9 1140 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 PRDM10Q9NQV6 1147 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 CFBP00751 764 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 ERCC3P19447 782 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 CDKAL1Q5VV42 579 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 ARHGAP4P98171 946 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 E4F1Q66K89 784 aaPredicted RBP15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 MICALL2Q8IY33 904 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 PDCL2Q8N4E4 241 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 CCDC150Q8NCX0 1101 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 GLIS3Q8NEA6 775 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 SLC39A2Q9NP94 309 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 PCDHA12Q9UN75 941 aa15.81■□□□□ 0.12
CARMIL3-203ENST00000560349 MYMKA6NI61 221 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 PES1O00541 588 aaKnown RBP15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 IDEP14735 1019 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 GMPSP49915 693 aaPredicted RBP15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 CBX1P83916 185 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 KRT31Q15323 416 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 GRIPAP1Q4V328 841 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 PAXIP1Q6ZW49 1069 aaPredicted RBP15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 FEZ1Q99689 392 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 ZNF341Q9BYN7 854 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 RMND1Q9NWS8 449 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 TMX2Q9Y320 296 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 ARFGEF1Q9Y6D6 1849 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 NKRFO15226 690 aaKnown RBP eCLIP15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 CAP2P40123 477 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 FXR2P51116 673 aaKnown RBP eCLIP15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 SPECC1LQ69YQ0 1117 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 PPP4R3AQ6IN85 833 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 EXOC1Q9NV70 894 aa15.8■□□□□ 0.12
CARMIL3-203ENST00000560349 A0A1B0GTH6 734 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 POTEB3A0JP26 581 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 SPDYE3A6NKU9 549 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 POTECB2RU33 542 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 FAM86B1E9PN63 330 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 FAM86B2P0C5J1 330 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 NR1I3Q14994 352 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 KRT79Q5XKE5 535 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 POTEBQ6S5H4 581 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 ADSSL1Q8N142 457 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 LARP4BQ92615 738 aaKnown RBP15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 RWDD2AQ9UIY3 292 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 CCAR2Q8N163 923 aaKnown RBP15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 GOPCQ9HD26 462 aa15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 ADD3Q9UEY8 706 aaKnown RBP15.79■□□□□ 0.12
CARMIL3-203ENST00000560349 E9PMD0 336 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 NCBP1Q09161 790 aaKnown RBP15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 ZBED3Q96IU2 234 aaPredicted RBP15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 TRIM47Q96LD4 638 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 POLD4Q9HCU8 107 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 PGAP2Q9UHJ9 254 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 ZHX1Q9UKY1 873 aaPredicted RBP15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 NPHP3-ACAD11A0A0J9YXS1 232 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 KCNJ18B7U540 433 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 MEIS1O00470 390 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 RHOBTB3O94955 611 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 KCNJ12Q14500 433 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 LRRC41Q15345 812 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 SV2BQ7L1I2 683 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 KIAA0895Q8NCT3 520 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 GIMAP8Q8ND71 665 aaPredicted RBP15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 TBC1D7Q9P0N9 293 aa15.78■□□□□ 0.12
CARMIL3-203ENST00000560349 POTEFA5A3E0 1075 aa15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 N4BP3O15049 544 aa15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 POTEIP0CG38 1075 aa15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 NAA30Q147X3 362 aaPredicted RBP15.77■□□□□ 0.12
CARMIL3-203ENST00000560349 POTEGQ6S5H5 508 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms