RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	IGBP1	P78318	339 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	CLUL1	Q15846	466 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	UAP1	Q16222	522 aa	Predicted RBP	10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	CCDC14	Q49A88	953 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	NACC1	Q96RE7	527 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	MROH7-TTC4	A0A0A0MT08	1334 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	GAP43	P17677	238 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	PTPN21	Q16825	1174 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	FAM47C	Q5HY64	1035 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	ARL6IP4	Q66PJ3	421 aa	Known RBP	10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	SEPT14	Q6ZU15	432 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	FAM160B2	Q86V87	743 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	HAUS4	Q9H6D7	363 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	ANKFY1	Q9P2R3	1169 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	TNNC2	P02585	160 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	HPD	P32754	393 aa	Predicted RBP	10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	ETF1	P62495	437 aa	Known RBP	10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	C6orf163	Q5TEZ5	329 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	ZBTB16	Q05516	673 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	AOC3	Q16853	763 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	LONRF2	Q1L5Z9	754 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	CEP128	Q6ZU80	1094 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	RIC8A	Q9NPQ8	531 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	ST7	Q9NRC1	585 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	PYCARD	Q9ULZ3	195 aa		10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	GOLGA8F	Q08AF8	430 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	GOLGA8DP	Q0D2H9	430 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	PFKFB3	Q16875	520 aa	Predicted RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	ADPGK	Q9BRR6	497 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	CPVL	Q9H3G5	476 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	UTY	O14607	1347 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	JCAD	Q9P266	1359 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	EBAG9	O00559	213 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	HNRNPDL	O14979	420 aa	Known RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	YARS	P54577	528 aa	Known RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	RASA3	Q14644	834 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	WHAMMP3	Q1A5X7	153 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	HACE1	Q8IYU2	909 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	MRRF	Q96E11	262 aa	Known RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	ZNF341	Q9BYN7	854 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	PLEKHA4	Q9H4M7	779 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	SAMSN1	Q9NSI8	373 aa	Known RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	STK36	Q9NRP7	1315 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	KCNK3	O14649	394 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	TMOD1	P28289	359 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	CDC27	P30260	824 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	MXRA7	P84157	204 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	RBL2	Q08999	1139 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	PAK2	Q13177	524 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	PPP1R21	Q6ZMI0	780 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	DPP9	Q86TI2	863 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	ZNF34	Q8IZ26	560 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	KIAA1524	Q8TCG1	905 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	ANO3	Q9BYT9	981 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	ADD3	Q9UEY8	706 aa	Known RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	RWDD2A	Q9UIY3	292 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	OSBP	P22059	807 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	CCND2	P30279	289 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	PDE6C	P51160	858 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	CCNA1	P78396	465 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	VPS72	Q15906	364 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	ENOX1	Q8TC92	643 aa	Known RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	DCAF4	Q8WV16	495 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	NKIRAS1	Q9NYS0	192 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	SPATA31A1	Q5TZJ5	1347 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	FAM196B	A6NMK8	535 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	CNGA1	P29973	690 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	ATP5D	P30049	168 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	PSMC2	P35998	433 aa	Known RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	FKBP3	Q00688	224 aa	Known RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	PTPRO	Q16827	1216 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	CCDC117	Q8IWD4	279 aa	Predicted RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	FBF1	Q8TES7	1133 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	SLC7A3	Q8WY07	619 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	CEP95	Q96GE4	821 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	RPGRIP1	Q96KN7	1286 aa		10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	ZC3H13	Q5T200	1668 aa	Known RBP	10.25	□□□□□ -0.77
NEO1-208	ENST00000560328	GAS8	O95995	478 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	ASNS	P08243	561 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	PLA2G4B	P0C869	781 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	RESP18	Q5W5W9	173 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	MARCH10	Q8NA82	808 aa	Predicted RBP	10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	MMS19	Q96T76	1030 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	HYOU1	Q9Y4L1	999 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	IGSF3	O75054	1194 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	H2AFZ	P0C0S5	128 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	TMEM191B	P0C7N4	346 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	MYL7	Q01449	175 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	CCDC121	Q6ZUS5	278 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	H2AFV	Q71UI9	128 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	SLC17A8	Q8NDX2	589 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	IPO4	Q8TEX9	1081 aa	Known RBP	10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	MTA3	Q9BTC8	594 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	USP42	Q9H9J4	1324 aa	Known RBP	10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	PSD	A5PKW4	1024 aa	Predicted RBP	10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	ZBTB5	O15062	677 aa		10.24	□□□□□ -0.77
NEO1-208	ENST00000560328	CAMTA2	O94983	1202 aa		10.24	□□□□□ -0.77

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