RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PIEZO1Q92508 2521 aa23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 TSPY2A6NKD2 308 aa23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 SLC16A2P36021 539 aa23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 LRRFIP1Q32MZ4 808 aaKnown RBP23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 BRDTQ58F21 947 aaPredicted RBP23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 ZMYM1Q5SVZ6 1142 aa23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 SLC30A10Q6XR72 485 aa23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 COPS5Q92905 334 aa23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 GPATCH3Q96I76 525 aa23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 DCTPP1Q9H773 170 aa23.37■■□□□ 1.33
RABGGTA-214ENST00000560163 PTPDC1A2A3K4 754 aa23.36■■□□□ 1.33
RABGGTA-214ENST00000560163 WDR5P61964 334 aaKnown RBP23.36■■□□□ 1.33
RABGGTA-214ENST00000560163 CTDSPL2Q05D32 466 aa23.36■■□□□ 1.33
RABGGTA-214ENST00000560163 PPP2R5BQ15173 497 aa23.36■■□□□ 1.33
RABGGTA-214ENST00000560163 SCFD2Q8WU76 684 aa23.36■■□□□ 1.33
RABGGTA-214ENST00000560163 RAD50Q92878 1312 aa23.35■■□□□ 1.33
RABGGTA-214ENST00000560163 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.35■■□□□ 1.33
RABGGTA-214ENST00000560163 FAM86C2PA6NEL3 165 aa23.35■■□□□ 1.33
RABGGTA-214ENST00000560163 SYDE2Q5VT97 1194 aa23.35■■□□□ 1.33
RABGGTA-214ENST00000560163 TMCO2Q7Z6W1 182 aaPredicted RBP23.35■■□□□ 1.33
RABGGTA-214ENST00000560163 MTMR7Q9Y216 660 aa23.35■■□□□ 1.33
RABGGTA-214ENST00000560163 MUC6Q6W4X9 2439 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 FGRP09769 529 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 CALML3P27482 149 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 KCNJ6P48051 423 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 PDE4DQ08499 809 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 PTGISQ16647 500 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 CCDC96Q2M329 555 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 RNF207Q6ZRF8 634 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 CAGE1Q8TC20 777 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 AFAP1L1Q8TED9 768 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 SUGCTQ9HAC7 445 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 ANAPC4Q9UJX5 808 aa23.34■■□□□ 1.33
RABGGTA-214ENST00000560163 ARIH2O95376 493 aa23.33■■□□□ 1.33
RABGGTA-214ENST00000560163 CXCL10P02778 98 aa23.33■■□□□ 1.33
RABGGTA-214ENST00000560163 TXNP10599 105 aaKnown RBP23.33■■□□□ 1.33
RABGGTA-214ENST00000560163 RPS6P62753 249 aaKnown RBP23.33■■□□□ 1.33
RABGGTA-214ENST00000560163 DEFB103AP81534 67 aa23.33■■□□□ 1.33
RABGGTA-214ENST00000560163 SESTD1Q86VW0 696 aa23.33■■□□□ 1.33
RABGGTA-214ENST00000560163 DNERQ8NFT8 737 aa23.33■■□□□ 1.33
RABGGTA-214ENST00000560163 PI4K2BQ8TCG2 481 aa23.33■■□□□ 1.33
RABGGTA-214ENST00000560163 GDPD5Q8WTR4 605 aa23.33■■□□□ 1.33
RABGGTA-214ENST00000560163 WDFY4Q6ZS81 3184 aa23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 ORC4O43929 436 aa23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 RANBP6O60518 1105 aaKnown RBP23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 ERVK-21P61565 698 aa23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 RBL2Q08999 1139 aa23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 TCTN1Q2MV58 587 aa23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 GDF6Q6KF10 455 aaPredicted RBP23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 CCDC62Q6P9F0 684 aa23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 DHX38Q92620 1227 aaKnown RBP23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 NOD1Q9Y239 953 aa23.32■■□□□ 1.32
RABGGTA-214ENST00000560163 GJB5O95377 273 aa23.31■■□□□ 1.32
RABGGTA-214ENST00000560163 SELPP16109 830 aa23.31■■□□□ 1.32
RABGGTA-214ENST00000560163 C20orf194Q5TEA3 1177 aa23.31■■□□□ 1.32
RABGGTA-214ENST00000560163 FAM178BQ8IXR5 827 aa23.31■■□□□ 1.32
RABGGTA-214ENST00000560163 KAT2BQ92831 832 aa23.31■■□□□ 1.32
RABGGTA-214ENST00000560163 RAD9AQ99638 391 aa23.31■■□□□ 1.32
RABGGTA-214ENST00000560163 TMEM47Q9BQJ4 181 aa23.31■■□□□ 1.32
RABGGTA-214ENST00000560163 UBE2ZQ9H832 354 aaPredicted RBP23.31■■□□□ 1.32
RABGGTA-214ENST00000560163 TTC41PQ6P2S7 1318 aa23.31■■□□□ 1.32
RABGGTA-214ENST00000560163 NBNO60934 754 aa23.3■■□□□ 1.32
RABGGTA-214ENST00000560163 LEXMQ3ZCV2 418 aa23.3■■□□□ 1.32
RABGGTA-214ENST00000560163 CNKSR3Q6P9H4 555 aa23.3■■□□□ 1.32
RABGGTA-214ENST00000560163 CCDC155Q8N6L0 562 aa23.3■■□□□ 1.32
RABGGTA-214ENST00000560163 ZBED2Q9BTP6 218 aa23.3■■□□□ 1.32
RABGGTA-214ENST00000560163 GPCPD1Q9NPB8 672 aa23.3■■□□□ 1.32
RABGGTA-214ENST00000560163 PNMA2Q9UL42 364 aa23.3■■□□□ 1.32
RABGGTA-214ENST00000560163 FRMPD2Q68DX3 1309 aaPredicted RBP23.3■■□□□ 1.32
RABGGTA-214ENST00000560163 LINC01553A4QN01 128 aa23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 PRR33A8MZF0 331 aa23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 PARNO95453 639 aaKnown RBP23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 TOP1P11387 765 aaKnown RBP23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 LRRC8DQ7L1W4 858 aa23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 AFG1LQ8WV93 481 aa23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 TGS1Q96RS0 853 aaKnown RBP23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 MPHOSPH6Q99547 160 aaKnown RBP23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 TCP11L1Q9NUJ3 509 aa23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 WDR19Q8NEZ3 1342 aa23.29■■□□□ 1.32
RABGGTA-214ENST00000560163 ABHD14A-ACY1A0A1B0GW23 586 aa23.28■■□□□ 1.32
RABGGTA-214ENST00000560163 MMP3P08254 477 aa23.28■■□□□ 1.32
RABGGTA-214ENST00000560163 PDHBP11177 359 aa23.28■■□□□ 1.32
RABGGTA-214ENST00000560163 CKBP12277 381 aa23.28■■□□□ 1.32
RABGGTA-214ENST00000560163 VPS53Q5VIR6 699 aa23.28■■□□□ 1.32
RABGGTA-214ENST00000560163 GJD3Q8N144 294 aa23.28■■□□□ 1.32
RABGGTA-214ENST00000560163 RGS22Q8NE09 1264 aa23.28■■□□□ 1.32
RABGGTA-214ENST00000560163 FSD1Q9BTV5 496 aa23.28■■□□□ 1.32
RABGGTA-214ENST00000560163 SIP14410 1827 aa23.28■■□□□ 1.32
RABGGTA-214ENST00000560163 CHMP4BP1P59074 171 aa23.27■■□□□ 1.32
RABGGTA-214ENST00000560163 ARHGAP1Q07960 439 aa23.27■■□□□ 1.32
RABGGTA-214ENST00000560163 TRAF7Q6Q0C0 670 aa23.27■■□□□ 1.32
RABGGTA-214ENST00000560163 MTUS1Q9ULD2 1270 aa23.27■■□□□ 1.32
RABGGTA-214ENST00000560163 TRIOO75962 3097 aa23.26■■□□□ 1.31
RABGGTA-214ENST00000560163 RBAK-RBAKDNI3L0D1 243 aa23.26■■□□□ 1.31
RABGGTA-214ENST00000560163 SNHG28P0DPA3 235 aa23.26■■□□□ 1.31
RABGGTA-214ENST00000560163 ALX1Q15699 326 aa23.26■■□□□ 1.31
RABGGTA-214ENST00000560163 ALYREFQ86V81 257 aaKnown RBP23.26■■□□□ 1.31
RABGGTA-214ENST00000560163 OTUD7AQ8TE49 926 aaPredicted RBP23.26■■□□□ 1.31
RABGGTA-214ENST00000560163 GTF2IRD1Q9UHL9 959 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms