RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 IWS1Q96ST2 819 aa23.79■■□□□ 1.4
CHRNA3-207ENST00000559941 RMDN3Q96TC7 470 aa23.79■■□□□ 1.4
CHRNA3-207ENST00000559941 POLR3EQ9NVU0 708 aa23.79■■□□□ 1.4
CHRNA3-207ENST00000559941 SCN10AQ9Y5Y9 1956 aa23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 OPLAHO14841 1288 aa23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 CFBP00751 764 aa23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 TXNP10599 105 aaKnown RBP23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 BMP2KLQ5H9B9 411 aa23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 FAM109BQ6ICB4 259 aaPredicted RBP23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 CATIPQ7Z7H3 387 aa23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 MTA3Q9BTC8 594 aa23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 MTMR10Q9NXD2 777 aa23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 PCDHA1Q9Y5I3 950 aa23.78■■□□□ 1.4
CHRNA3-207ENST00000559941 HSD17B4P51659 736 aa23.77■■□□□ 1.4
CHRNA3-207ENST00000559941 PSMC6P62333 389 aa23.77■■□□□ 1.4
CHRNA3-207ENST00000559941 TTLL4Q14679 1199 aa23.77■■□□□ 1.4
CHRNA3-207ENST00000559941 STXBP2Q15833 593 aa23.77■■□□□ 1.4
CHRNA3-207ENST00000559941 BRDTQ58F21 947 aaPredicted RBP23.77■■□□□ 1.4
CHRNA3-207ENST00000559941 COPS5Q92905 334 aa23.77■■□□□ 1.4
CHRNA3-207ENST00000559941 MAP3K20Q9NYL2 800 aaKnown RBP23.77■■□□□ 1.4
CHRNA3-207ENST00000559941 A6NJR5 290 aa23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 CYTH3O43739 400 aa23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 ARIH2O95376 493 aa23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 PURAQ00577 322 aaKnown RBP23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 TRAF1Q13077 416 aa23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 ARHGEF16Q5VV41 709 aa23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 CCDC62Q6P9F0 684 aa23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 HOMER1Q86YM7 354 aa23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 SAMD3Q8N6K7 520 aa23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 PIGSQ96S52 555 aa23.76■■□□□ 1.39
CHRNA3-207ENST00000559941 MYH7BA7E2Y1 1941 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 SLC27A2O14975 620 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 MYL3P08590 195 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 PPIGQ13427 754 aaKnown RBP eCLIP23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 NECTIN1Q15223 517 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 SKAP1Q86WV1 359 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 TMEM199Q8N511 208 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 RNPC3Q96LT9 517 aaKnown RBP23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 MAP3K14Q99558 947 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 MTG1Q9BT17 334 aaPredicted RBP23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 PPP1R12CQ9BZL4 782 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 LY9Q9HBG7 655 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 PXMP2Q9NR77 195 aa23.75■■□□□ 1.39
CHRNA3-207ENST00000559941 KPNA6O60684 536 aa23.74■■□□□ 1.39
CHRNA3-207ENST00000559941 NR3C2P08235 984 aa23.74■■□□□ 1.39
CHRNA3-207ENST00000559941 EIF2AK2P19525 551 aaKnown RBP23.74■■□□□ 1.39
CHRNA3-207ENST00000559941 SMAD3P84022 425 aaKnown RBP23.74■■□□□ 1.39
CHRNA3-207ENST00000559941 CASC1Q6TDU7 716 aa23.74■■□□□ 1.39
CHRNA3-207ENST00000559941 SEPT14Q6ZU15 432 aa23.74■■□□□ 1.39
CHRNA3-207ENST00000559941 TRPV6Q9H1D0 765 aa23.74■■□□□ 1.39
CHRNA3-207ENST00000559941 GPHNQ9NQX3 736 aaPredicted RBP23.74■■□□□ 1.39
CHRNA3-207ENST00000559941 PNMA6FA0A0J9YX94 578 aa23.73■■□□□ 1.39
CHRNA3-207ENST00000559941 PRC1O43663 620 aa23.73■■□□□ 1.39
CHRNA3-207ENST00000559941 B4GALT4O60513 344 aa23.73■■□□□ 1.39
CHRNA3-207ENST00000559941 EIF3JO75822 258 aaKnown RBP23.73■■□□□ 1.39
CHRNA3-207ENST00000559941 MCM5P33992 734 aa23.73■■□□□ 1.39
CHRNA3-207ENST00000559941 CREB3L3Q68CJ9 461 aa23.73■■□□□ 1.39
CHRNA3-207ENST00000559941 TMEM87BQ96K49 555 aa23.73■■□□□ 1.39
CHRNA3-207ENST00000559941 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.73■■□□□ 1.39
CHRNA3-207ENST00000559941 ANO2Q9NQ90 1003 aa23.73■■□□□ 1.39
CHRNA3-207ENST00000559941 CSF2RAP15509 400 aa23.72■■□□□ 1.39
CHRNA3-207ENST00000559941 CYP2C18P33260 490 aa23.72■■□□□ 1.39
CHRNA3-207ENST00000559941 LY6KQ17RY6 165 aa23.72■■□□□ 1.39
CHRNA3-207ENST00000559941 C16orf59Q7L2K0 433 aa23.72■■□□□ 1.39
CHRNA3-207ENST00000559941 ZNF654Q8IZM8 581 aa23.72■■□□□ 1.39
CHRNA3-207ENST00000559941 TMTC2Q8N394 836 aa23.72■■□□□ 1.39
CHRNA3-207ENST00000559941 ALDH8A1Q9H2A2 487 aaPredicted RBP23.72■■□□□ 1.39
CHRNA3-207ENST00000559941 HIPK3Q9H422 1215 aa23.72■■□□□ 1.39
CHRNA3-207ENST00000559941 COL6A3P12111 3177 aa23.71■■□□□ 1.39
CHRNA3-207ENST00000559941 DDAH1O94760 285 aa23.71■■□□□ 1.39
CHRNA3-207ENST00000559941 GH1P01241 217 aa23.71■■□□□ 1.39
CHRNA3-207ENST00000559941 TMEM240Q5SV17 173 aa23.71■■□□□ 1.39
CHRNA3-207ENST00000559941 ZNF697Q5TEC3 545 aa23.71■■□□□ 1.39
CHRNA3-207ENST00000559941 CTCFLQ8NI51 663 aaPredicted RBP23.71■■□□□ 1.39
CHRNA3-207ENST00000559941 PDCD2LQ9BRP1 358 aa23.71■■□□□ 1.39
CHRNA3-207ENST00000559941 STXBP5LQ9Y2K9 1186 aa23.71■■□□□ 1.39
CHRNA3-207ENST00000559941 UMODL1Q5DID0 1318 aa23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 GCOM1H8Y6P7 765 aaPredicted RBP23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 SH2B2O14492 632 aaPredicted RBP23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 SUPT20HL2P0C7V6 817 aa23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 POLR2MP0CAP2 368 aa23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 HOXA13P31271 388 aaPredicted RBP23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 ARHGAP1Q07960 439 aa23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 COL9A3Q14050 684 aaPredicted RBP23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 NBPF20Q3BBV1 942 aa23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 NOC4LQ9BVI4 516 aaKnown RBP23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 SPZ1Q9BXG8 430 aa23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 DDX41Q9UJV9 622 aaKnown RBP23.7■■□□□ 1.38
CHRNA3-207ENST00000559941 SMARCA1P28370 1054 aa23.69■■□□□ 1.38
CHRNA3-207ENST00000559941 KIF5BP33176 963 aa23.69■■□□□ 1.38
CHRNA3-207ENST00000559941 LIFRP42702 1097 aa23.69■■□□□ 1.38
CHRNA3-207ENST00000559941 VSIG10LQ86VR7 867 aa23.69■■□□□ 1.38
CHRNA3-207ENST00000559941 AFG1LQ8WV93 481 aa23.69■■□□□ 1.38
CHRNA3-207ENST00000559941 MYL10Q9BUA6 226 aa23.69■■□□□ 1.38
CHRNA3-207ENST00000559941 IL23AQ9NPF7 189 aa23.69■■□□□ 1.38
CHRNA3-207ENST00000559941 TRMT13Q9NUP7 481 aaKnown RBP23.69■■□□□ 1.38
CHRNA3-207ENST00000559941 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 CCDC69A6NI79 296 aa23.68■■□□□ 1.38
CHRNA3-207ENST00000559941 MMP3P08254 477 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms