RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 GOLGA1Q92805 767 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 CSRNP2Q9H175 543 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 PCDHA6Q9UN73 950 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 PCDHA8Q9Y5H6 950 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 CETN3O15182 167 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 MCM3P25205 808 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 CCND2P30279 289 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 MYL5Q02045 173 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 SRBD1Q8N5C6 995 aaKnown RBP11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 KIF2CQ99661 725 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 NRBP2Q9NSY0 501 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 C19orf81C9J6K1 198 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 NR1I2O75469 434 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 CSGALNACT2Q8N6G5 542 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 DEPTORQ8TB45 409 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 WDR11Q9BZH6 1224 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 VPS33BQ9H267 617 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 SENP2Q9HC62 589 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 CTNND2Q9UQB3 1225 aa11.82□□□□□ -0.52
CARMIL3-202ENST00000559694 LONP1P36776 959 aaKnown RBP11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 SNAPC2Q13487 334 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 PNOCQ13519 176 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 GRIK5Q16478 980 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 ERCC6LQ2NKX8 1250 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 DPH6Q7L8W6 267 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 LPAR1Q92633 364 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 DPF2Q92785 391 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 CARD6Q9BX69 1037 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 ACER1Q8TDN7 264 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 DRC1Q96MC2 740 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 DNA2P51530 1060 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 RCAN1P53805 252 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 ANTXR2P58335 489 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 UBXN1Q04323 297 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 ATP6V0A1Q93050 837 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 LARSQ9P2J5 1176 aaKnown RBP11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 EXOC7Q9UPT5 735 aa11.81□□□□□ -0.52
CARMIL3-202ENST00000559694 CCL15-CCL14A0A0B4J2E2 113 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 EXOC3O60645 756 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 CAP2P40123 477 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 PPP1R2P41236 205 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 CCL15Q16663 113 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 MLKLQ8NB16 471 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 GLIS2Q9BZE0 524 aaPredicted RBP11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 TMEM260Q9NX78 707 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 MEIS1O00470 390 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 WDR46O15213 610 aaKnown RBP11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 FDX1P10109 184 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 NDUFA8P51970 172 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 POLGP54098 1239 aaPredicted RBP11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 TTC31Q49AM3 519 aaPredicted RBP11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 NSUN6Q8TEA1 469 aaKnown RBP11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 VPS16Q9H269 839 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 NRBP1Q9UHY1 535 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 CTAGE15A4D2H0 777 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 CTAGE8P0CG41 777 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 EPB41P11171 864 aaKnown RBP11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 RNF187Q5TA31 235 aaPredicted RBP11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 FAM160B1Q5W0V3 765 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 APOBEC3HQ6NTF7 200 aaKnown RBP11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 APBB1IPQ7Z5R6 666 aaPredicted RBP11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 CTAGE6Q86UF2 777 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 CTAGE4Q8IX94 777 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 TBC1D5Q92609 795 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 POLR3EQ9NVU0 708 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 RABGAP1Q9Y3P9 1069 aa11.8□□□□□ -0.52
CARMIL3-202ENST00000559694 USO1O60763 962 aaKnown RBP11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 STXBP2Q15833 593 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 MICALL1Q8N3F8 863 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 RNF169Q8NCN4 708 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 LINC00301Q8NCQ3 95 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 ACAD9Q9H845 621 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 FBXO28Q9NVF7 368 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 SEPT9Q9UHD8 586 aaPredicted RBP11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 SALL3Q9BXA9 1300 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 LRRIQ4A6NIV6 560 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 LAD1O00515 517 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 PDHBP11177 359 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 FCER1AP12319 257 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 GUCY1A2P33402 732 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 TBC1D8BQ0IIM8 1120 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 Q3C1V9 767 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 FAM178BQ8IXR5 827 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 SCYL3Q8IZE3 742 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 CERS5Q8N5B7 392 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 TEX13BQ9BXU2 312 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 SH3GLB2Q9NR46 395 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 BARHL2Q9NY43 387 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 PRR12Q9ULL5 1215 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 TMOD1P28289 359 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 ECE1P42892 770 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 NOP2P46087 812 aaKnown RBP11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 ARHGAP4P98171 946 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 PAK1Q13153 545 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 AP3B2Q13367 1082 aa11.79□□□□□ -0.52
CARMIL3-202ENST00000559694 TAF4BQ92750 862 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms