RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 TMEM232C9JQI7 657 aa10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 SNPHO15079 494 aa10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 RASA1P20936 1047 aa10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 IRS1P35568 1242 aa10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 PDAP1Q13442 181 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 BFSP2Q13515 415 aa10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 MUM1L1Q5H9M0 696 aa10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 TMED8Q6PL24 325 aaPredicted RBP10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 TRMT2AQ8IZ69 625 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 WDR11Q9BZH6 1224 aa10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 NYAP2Q9P242 653 aa10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 NOP58Q9Y2X3 529 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-208ENST00000559686 IPO8O15397 1037 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 GFRA3O60609 400 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 PRDM1O75626 825 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 CSPG5O95196 566 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 BMP3P12645 472 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 ADD2P35612 726 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 CPT1AP50416 773 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 SLFN13Q68D06 897 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 NEK9Q8TD19 979 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 COPS5Q92905 334 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 RAD9AQ99638 391 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 CLDND1Q9NY35 253 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 MTMR7Q9Y216 660 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 Q9Y3F1 56 aa10.69□□□□□ -0.7
SNRPA1-208ENST00000559686 MYH7P12883 1935 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 GJB5O95377 273 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 OAZ1P54368 228 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 PTPN5P54829 565 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 PTGISQ16647 500 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 PUS10Q3MIT2 529 aaKnown RBP10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 DUSP28Q4G0W2 176 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 TCEAL5Q5H9L2 206 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 CNKSR3Q6P9H4 555 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 LRRC8DQ7L1W4 858 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 BANK1Q8NDB2 785 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 MRPL38Q96DV4 380 aaKnown RBP10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 CEP95Q96GE4 821 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 BOLA2Q9H3K6 86 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 VTA1Q9NP79 307 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 PAG1Q9NWQ8 432 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 CYP39A1Q9NYL5 469 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 FAM50BQ9Y247 325 aa10.68□□□□□ -0.7
SNRPA1-208ENST00000559686 SCN10AQ9Y5Y9 1956 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 STAT2P52630 851 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 NBR1Q14596 966 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 GPNMBQ14956 572 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 GDF6Q6KF10 455 aaPredicted RBP10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.67□□□□□ -0.77e-6■□□□□ 8.4
SNRPA1-208ENST00000559686 KCTD1Q719H9 257 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 RASGRP2Q7LDG7 609 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 RNF135Q8IUD6 432 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 ADHFE1Q8IWW8 467 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 PBXIP1Q96AQ6 731 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 TMEM121BQ9BXQ6 578 aaPredicted RBP10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 UPF3BQ9BZI7 483 aaKnown RBP10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 ARPP21Q9UBL0 812 aaPredicted RBP10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 ZNF318Q5VUA4 2279 aa10.67□□□□□ -0.7
SNRPA1-208ENST00000559686 NLRC5Q86WI3 1866 aa10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 NBNO60934 754 aa10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 IFIT2P09913 472 aaKnown RBP10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 SELPP16109 830 aa10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 ALDH5A1P51649 535 aaPredicted RBP10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 PTPROQ16827 1216 aa10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 LRRFIP1Q32MZ4 808 aaKnown RBP10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 BRDTQ58F21 947 aaPredicted RBP10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 ERC1Q8IUD2 1116 aa10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 ITPRIPQ8IWB1 547 aa10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 MYOCDQ8IZQ8 938 aa10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 AFAP1L1Q8TED9 768 aa10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 PABPC5Q96DU9 382 aaKnown RBP10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 PUS7LQ9H0K6 701 aaKnown RBP10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 CCPG1Q9ULG6 757 aa10.66□□□□□ -0.7
SNRPA1-208ENST00000559686 ZBED9Q6R2W3 1325 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 ATG2AQ2TAZ0 1938 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 IGKV6D-41A0A0C4DH26 115 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 PTPDC1A2A3K4 754 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 TMEM221A6NGB7 291 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 M0R296 226 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 MCCP23508 829 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 TCF15Q12870 199 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 GPM6BQ13491 265 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 IKBKEQ14164 716 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 PPP2R5BQ15173 497 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 TKFCQ3LXA3 575 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 EPC2Q52LR7 807 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 TIGD5Q53EQ6 642 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 RPAINQ86UA6 219 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 SUGP1Q8IWZ8 645 aaKnown RBP10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 ZNF444Q8N0Y2 327 aaPredicted RBP10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 RHPN1Q8TCX5 695 aa10.65□□□□□ -0.7
SNRPA1-208ENST00000559686 CHURC1Q8WUH1 139 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms