RNA–Protein interactions for RNA: ENST00000559586.5

RABGGTA-210, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-210ENST00000559586 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.28■■□□□ 1.329e-7■□□□□ 10
RABGGTA-210ENST00000559586 RIOX1Q9H6W3 641 aa23.28■■□□□ 1.32
RABGGTA-210ENST00000559586 VAT1LQ9HCJ6 419 aa23.28■■□□□ 1.32
RABGGTA-210ENST00000559586 Q9Y3F1 56 aa23.28■■□□□ 1.32
RABGGTA-210ENST00000559586 ASTN1O14525 1302 aa23.28■■□□□ 1.32
RABGGTA-210ENST00000559586 PPP1R11O60927 126 aaPredicted RBP23.27■■□□□ 1.32
RABGGTA-210ENST00000559586 IQSEC1Q6DN90 963 aa23.27■■□□□ 1.32
RABGGTA-210ENST00000559586 JAKMIP1Q96N16 626 aaKnown RBP23.27■■□□□ 1.32
RABGGTA-210ENST00000559586 CYP39A1Q9NYL5 469 aa23.27■■□□□ 1.32
RABGGTA-210ENST00000559586 SOWAHBA6NEL2 793 aa23.26■■□□□ 1.31
RABGGTA-210ENST00000559586 TMEM240Q5SV17 173 aa23.26■■□□□ 1.31
RABGGTA-210ENST00000559586 TLK2Q86UE8 772 aa23.26■■□□□ 1.31
RABGGTA-210ENST00000559586 TIFAQ96CG3 184 aa23.26■■□□□ 1.31
RABGGTA-210ENST00000559586 MTIF3Q9H2K0 278 aaKnown RBP23.26■■□□□ 1.31
RABGGTA-210ENST00000559586 PNMA2Q9UL42 364 aa23.26■■□□□ 1.31
RABGGTA-210ENST00000559586 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
RABGGTA-210ENST00000559586 GNEQ9Y223 722 aaKnown RBP23.26■■□□□ 1.31
RABGGTA-210ENST00000559586 CCDC69A6NI79 296 aa23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 CTAGE5O15320 804 aa23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 HMGB1P09429 215 aaKnown RBP23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 RXRAP19793 462 aa23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 IRX5P78411 483 aaPredicted RBP23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 FSCN1Q16658 493 aaKnown RBP23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 NFXL1Q6ZNB6 911 aa23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 RAB11FIP4Q86YS3 637 aa23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 SLC43A3Q8NBI5 491 aa23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 SYMPKQ92797 1274 aaKnown RBP23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 PURBQ96QR8 312 aaKnown RBP23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 ZNF576Q9H609 170 aa23.25■■□□□ 1.31
RABGGTA-210ENST00000559586 LOC102724159A0A0B4J2E5 919 aa23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 SEC24BO95487 1268 aa23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 CD4P01730 458 aa23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 CSF2RAP15509 400 aa23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 BEX3Q00994 111 aa23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 PWP2Q15269 919 aaKnown RBP23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 USH1GQ495M9 461 aa23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 RASIP1Q5U651 963 aa23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 APOA5Q6Q788 366 aa23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 VTA1Q9NP79 307 aa23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 ADD3Q9UEY8 706 aaKnown RBP23.24■■□□□ 1.31
RABGGTA-210ENST00000559586 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 DYNC1LI2O43237 492 aaPredicted RBP23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 DHX16O60231 1041 aaKnown RBP23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 PLEKHA8P1O95397 391 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 RPS6KB1P23443 525 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 ITGA7Q13683 1181 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 BAATQ14032 418 aaPredicted RBP23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 GRIN2CQ14957 1233 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 CXCL17Q6UXB2 119 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 NSMFQ6X4W1 530 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 C16orf59Q7L2K0 433 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 PIGSQ96S52 555 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 AGXT2Q9BYV1 514 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 PPP1R12CQ9BZL4 782 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 IL23AQ9NPF7 189 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 SLC12A7Q9Y666 1083 aa23.23■■□□□ 1.31
RABGGTA-210ENST00000559586 OPLAHO14841 1288 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 ZBTB5O15062 677 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 BLOC1S2Q6QNY1 142 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 SLC30A10Q6XR72 485 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 ZNF365Q70YC5 407 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 FBXO11Q86XK2 927 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 FBXL16Q8N461 479 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 SRBD1Q8N5C6 995 aaKnown RBP23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 CTCFLQ8NI51 663 aaPredicted RBP23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 TBC1D5Q92609 795 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 SPZ1Q9BXG8 430 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 ZSWIM6Q9HCJ5 1215 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 DDX49Q9Y6V7 483 aaKnown RBP23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 CDH23Q9H251 3354 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 EYSQ5T1H1 3165 aa23.22■■□□□ 1.31
RABGGTA-210ENST00000559586 SMPD1P17405 629 aa23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 CASTP20810 708 aaKnown RBP23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 SMARCA1P28370 1054 aa23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 KIF5BP33176 963 aa23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 FANCBQ8NB91 859 aa23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 RGS22Q8NE09 1264 aa23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 MORC4Q8TE76 937 aa23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 GAS2L1Q99501 681 aaPredicted RBP23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 HIPK3Q9H422 1215 aa23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 MSRAQ9UJ68 235 aa23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 ABCB11O95342 1321 aa23.21■■□□□ 1.31
RABGGTA-210ENST00000559586 LRRC37A2A6NM11 1700 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 FGBP02675 491 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 CALM1P0DP23 149 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 CALM2P0DP24 149 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 CALM3P0DP25 149 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 CYP2C18P33260 490 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 RPS6P62753 249 aaKnown RBP23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 RAB30Q15771 203 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 TAPT1Q6NXT6 567 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 Q6ZUG5 572 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 MICU3Q86XE3 530 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 CMTR1Q8N1G2 835 aaKnown RBP23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 HERVK_113Q902F9 699 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 MPHOSPH6Q99547 160 aaKnown RBP23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 AMNQ9BXJ7 453 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 TM6SF1Q9BZW5 370 aa23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 FAM217BQ9NTX9 383 aaPredicted RBP23.2■■□□□ 1.3
RABGGTA-210ENST00000559586 PRUNE2Q8WUY3 3088 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms