RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 CXXC1Q9P0U4 656 aaPredicted RBP23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 TAF6LQ9Y6J9 622 aa23.95■■□□□ 1.42
TSPAN3-206ENST00000559373 TANC1Q9C0D5 1861 aa23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 TXNP10599 105 aaKnown RBP23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 EDNRBP24530 442 aa23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 FAM47CQ5HY64 1035 aa23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 IFIT1BQ5T764 474 aaKnown RBP23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 SEPT14Q6ZU15 432 aa23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 OTOP2Q7RTS6 562 aa23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 DNERQ8NFT8 737 aa23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 NOC4LQ9BVI4 516 aaKnown RBP23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 WNT8AQ9H1J5 351 aa23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 ALDH8A1Q9H2A2 487 aaPredicted RBP23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 IL23AQ9NPF7 189 aa23.94■■□□□ 1.42
TSPAN3-206ENST00000559373 ABCB11O95342 1321 aa23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 FOSL2P15408 326 aa23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 CPT1AP50416 773 aa23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 FBXO11Q86XK2 927 aa23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 SYTL5Q8TDW5 730 aaPredicted RBP23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 CNNM2Q9H8M5 875 aa23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 SENP2Q9HC62 589 aa23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 GPHNQ9NQX3 736 aaPredicted RBP23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 POLR3EQ9NVU0 708 aa23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 PNMA2Q9UL42 364 aa23.93■■□□□ 1.42
TSPAN3-206ENST00000559373 PTPRSQ13332 1948 aa23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 SEC23AQ15436 765 aa23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 LY6KQ17RY6 165 aa23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 NBPF20Q3BBV1 942 aa23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 CHST3Q7LGC8 479 aa23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 SCFD2Q8WU76 684 aa23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 TIFAQ96CG3 184 aa23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 MPHOSPH6Q99547 160 aaKnown RBP23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 PBX4Q9BYU1 374 aa23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 ZNF576Q9H609 170 aa23.92■■□□□ 1.42
TSPAN3-206ENST00000559373 LOC102724159A0A0B4J2E5 919 aa23.91■■□□□ 1.42
TSPAN3-206ENST00000559373 CFBP00751 764 aa23.91■■□□□ 1.42
TSPAN3-206ENST00000559373 FGBP02675 491 aa23.91■■□□□ 1.42
TSPAN3-206ENST00000559373 PWP2Q15269 919 aaKnown RBP23.91■■□□□ 1.42
TSPAN3-206ENST00000559373 RASIP1Q5U651 963 aa23.91■■□□□ 1.42
TSPAN3-206ENST00000559373 PSRC1Q6PGN9 363 aaPredicted RBP23.91■■□□□ 1.42
TSPAN3-206ENST00000559373 MTG1Q9BT17 334 aaPredicted RBP23.91■■□□□ 1.42
TSPAN3-206ENST00000559373 VCANP13611 3396 aa23.91■■□□□ 1.42
TSPAN3-206ENST00000559373 REV3LO60673 3130 aa23.9■■□□□ 1.42
TSPAN3-206ENST00000559373 PPP1R11O60927 126 aaPredicted RBP23.9■■□□□ 1.42
TSPAN3-206ENST00000559373 CYP21A2P08686 494 aa23.9■■□□□ 1.42
TSPAN3-206ENST00000559373 EIF2AK2P19525 551 aaKnown RBP23.9■■□□□ 1.42
TSPAN3-206ENST00000559373 CHMLP26374 656 aa23.9■■□□□ 1.42
TSPAN3-206ENST00000559373 RMDN3Q96TC7 470 aa23.9■■□□□ 1.42
TSPAN3-206ENST00000559373 MAD2L2Q9UI95 211 aa23.9■■□□□ 1.42
TSPAN3-206ENST00000559373 CHD7Q9P2D1 2997 aa23.9■■□□□ 1.42
TSPAN3-206ENST00000559373 KLRF2D3W0D1 207 aa23.89■■□□□ 1.41
TSPAN3-206ENST00000559373 SORBS3O60504 671 aa23.89■■□□□ 1.41
TSPAN3-206ENST00000559373 TTLL4Q14679 1199 aa23.89■■□□□ 1.41
TSPAN3-206ENST00000559373 DEFB128Q7Z7B8 93 aa23.89■■□□□ 1.41
TSPAN3-206ENST00000559373 RGS22Q8NE09 1264 aa23.89■■□□□ 1.41
TSPAN3-206ENST00000559373 VWCEQ96DN2 955 aa23.89■■□□□ 1.41
TSPAN3-206ENST00000559373 ZFP91Q96JP5 570 aaPredicted RBP23.89■■□□□ 1.41
TSPAN3-206ENST00000559373 MRPL11Q9Y3B7 192 aaKnown RBP23.89■■□□□ 1.41
TSPAN3-206ENST00000559373 OPLAHO14841 1288 aa23.88■■□□□ 1.41
TSPAN3-206ENST00000559373 NKRFO15226 690 aaKnown RBP eCLIP23.88■■□□□ 1.412e-6■□□□□ 8.4
TSPAN3-206ENST00000559373 RABGGTBP53611 331 aa23.88■■□□□ 1.41
TSPAN3-206ENST00000559373 SLC35G1Q2M3R5 365 aa23.88■■□□□ 1.41
TSPAN3-206ENST00000559373 ARHGEF16Q5VV41 709 aa23.88■■□□□ 1.41
TSPAN3-206ENST00000559373 HOMER1Q86YM7 354 aa23.88■■□□□ 1.41
TSPAN3-206ENST00000559373 NSUN6Q8TEA1 469 aaKnown RBP23.88■■□□□ 1.41
TSPAN3-206ENST00000559373 AFG1LQ8WV93 481 aa23.88■■□□□ 1.41
TSPAN3-206ENST00000559373 HERVK_113Q902F9 699 aa23.88■■□□□ 1.41
TSPAN3-206ENST00000559373 COL25A1Q9BXS0 654 aaPredicted RBP23.88■■□□□ 1.41
TSPAN3-206ENST00000559373 RAD50Q92878 1312 aa23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 A6NJR5 290 aa23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 B4DLN1 442 aa23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 MRPL12P52815 198 aaKnown RBP23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 TRDNQ13061 729 aa23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 BRDTQ58F21 947 aaPredicted RBP23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 CCDC62Q6P9F0 684 aa23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 MCF2L2Q86YR7 1114 aa23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 PIBF1Q8WXW3 757 aa23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 NKX2-4Q9H2Z4 354 aa23.87■■□□□ 1.41
TSPAN3-206ENST00000559373 ZBBXA8MT70 800 aa23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 IFIT3O14879 490 aaKnown RBP23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 MYOGP15173 224 aa23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 HOXA13P31271 388 aaPredicted RBP23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 STXBP2Q15833 593 aa23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 STOX1Q6ZVD7 989 aa23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 USP38Q8NB14 1042 aa23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 RUFY2Q8WXA3 655 aa23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 PPM1EQ8WY54 764 aa23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 PRDM12Q9H4Q4 367 aa23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 YBX2Q9Y2T7 364 aaKnown RBP23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 KAT6AQ92794 2004 aa23.86■■□□□ 1.41
TSPAN3-206ENST00000559373 TMEM265A0A087WTH1 108 aa23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 PALM3A6NDB9 673 aaPredicted RBP23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 E7EWF7 191 aa23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 MMP3P08254 477 aa23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 MYCLP12524 364 aaPredicted RBP23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 NT5C2P49902 561 aa23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 ARHGAP1Q07960 439 aa23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 PIGSQ96S52 555 aa23.85■■□□□ 1.41
TSPAN3-206ENST00000559373 AMNQ9BXJ7 453 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms