RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 NLRC5Q86WI3 1866 aa13.22□□□□□ -0.29
CHRNA3-205ENST00000559080 MYH6P13533 1939 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 FAM86C2PA6NEL3 165 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 ORC4O43929 436 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 RANBP6O60518 1105 aaKnown RBP13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 PLA2G6O60733 806 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 ALAS1P13196 640 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 SDSP20132 328 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 FAM160B2Q86V87 743 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 HERC6Q8IVU3 1022 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 GMCL1Q96IK5 515 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 STX8Q9UNK0 236 aa13.21□□□□□ -0.29
CHRNA3-205ENST00000559080 ZNF318Q5VUA4 2279 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 FGAP02671 866 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 ACTN1P12814 892 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 RFC2P35250 354 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 SNAP25P60880 206 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 RRP12Q5JTH9 1297 aaKnown RBP13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 RASGRP2Q7LDG7 609 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 PPP1R13LQ8WUF5 828 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 POLR3EQ9NVU0 708 aa13.2□□□□□ -0.3
CHRNA3-205ENST00000559080 RBM47A0AV96 593 aaKnown RBP13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 LCHNA4D1U4 455 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 MCCP23508 829 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 SLC1A4P43007 532 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 IKQ13123 557 aaPredicted RBP13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 GPNMBQ14956 572 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 NBPF20Q3BBV1 942 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 CWC27Q6UX04 472 aaKnown RBP13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 WDR11Q9BZH6 1224 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 PRR12Q9ULL5 1215 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 MYO7AQ13402 2215 aa13.19□□□□□ -0.3
CHRNA3-205ENST00000559080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 MYL3P08590 195 aa13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 PCP11498 1178 aaKnown RBP13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 ALDH5A1P51649 535 aaPredicted RBP13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 HAND2P61296 217 aa13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 RCSD1Q6JBY9 416 aa13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 NFRKBQ6P4R8 1299 aa13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 NSMFQ6X4W1 530 aa13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 ALYREFQ86V81 257 aaKnown RBP13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 CTAGE1Q96RT6 745 aa13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 RNF41Q9H4P4 317 aaPredicted RBP13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 INCENPQ9NQS7 918 aa13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 LMCD1Q9NZU5 365 aa13.18□□□□□ -0.3
CHRNA3-205ENST00000559080 KIF28PB7ZC32 967 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 NMT2O60551 498 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 BAIAP3O94812 1187 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 FGRP09769 529 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 CPT1AP50416 773 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 BAATQ14032 418 aaPredicted RBP13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 TTC22Q5TAA0 569 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 MFSD6Q6ZSS7 791 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 TMCO2Q7Z6W1 182 aaPredicted RBP13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 FTOQ9C0B1 505 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 SUGCTQ9HAC7 445 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 MTMR7Q9Y216 660 aa13.17□□□□□ -0.3
CHRNA3-205ENST00000559080 LOC102724159A0A0B4J2E5 919 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 A6NJR5 290 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 PRR33A8MZF0 331 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 RBAK-RBAKDNI3L0D1 243 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 ZNF213O14771 459 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 ICAM1P05362 532 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 PDE4AP27815 886 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 WDR5P61964 334 aaKnown RBP13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 PTPN11Q06124 597 aaPredicted RBP13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 PWP2Q15269 919 aaKnown RBP13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 FAM47CQ5HY64 1035 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 FAM178BQ8IXR5 827 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 RETREG2Q8NC44 543 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 OR6J1Q8NGC5 347 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 RANBP17Q9H2T7 1088 aaKnown RBP13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 ADD3Q9UEY8 706 aaKnown RBP13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 CCPG1Q9ULG6 757 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 RALGAPA2Q2PPJ7 1873 aa13.16□□□□□ -0.3
CHRNA3-205ENST00000559080 RAD50Q92878 1312 aa13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 NFIBO00712 420 aa13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 GSPT1P15170 499 aaKnown RBP13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 NOVP48745 357 aa13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 DEFB103AP81534 67 aa13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 TCTN1Q2MV58 587 aa13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 ESR2Q92731 530 aa13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 COPS5Q92905 334 aa13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 DSCC1Q9BVC3 393 aa13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 UBE2ZQ9H832 354 aaPredicted RBP13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
CHRNA3-205ENST00000559080 NEDD4P46934 1319 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms