RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TAAR1Q96RJ0 339 aa19.79■□□□□ 0.76
LRRC28-210ENST00000558879 SEZ6LQ9BYH1 1024 aa19.79■□□□□ 0.76
LRRC28-210ENST00000558879 LY9Q9HBG7 655 aa19.79■□□□□ 0.76
LRRC28-210ENST00000558879 SLC27A2O14975 620 aa19.78■□□□□ 0.76
LRRC28-210ENST00000558879 ARIH2O95376 493 aa19.78■□□□□ 0.76
LRRC28-210ENST00000558879 TIMP1P01033 207 aa19.78■□□□□ 0.76
LRRC28-210ENST00000558879 EPHB4P54760 987 aa19.78■□□□□ 0.76
LRRC28-210ENST00000558879 FPGSQ05932 587 aa19.78■□□□□ 0.76
LRRC28-210ENST00000558879 ITGA7Q13683 1181 aa19.78■□□□□ 0.76
LRRC28-210ENST00000558879 COL9A3Q14050 684 aaPredicted RBP19.78■□□□□ 0.76
LRRC28-210ENST00000558879 OR6J1Q8NGC5 347 aa19.78■□□□□ 0.76
LRRC28-210ENST00000558879 NSUN6Q8TEA1 469 aaKnown RBP19.78■□□□□ 0.76
LRRC28-210ENST00000558879 MAP3K14Q99558 947 aa19.78■□□□□ 0.76
LRRC28-210ENST00000558879 TLR3O15455 904 aaKnown RBP19.77■□□□□ 0.76
LRRC28-210ENST00000558879 CPT1AP50416 773 aa19.77■□□□□ 0.76
LRRC28-210ENST00000558879 PURAQ00577 322 aaKnown RBP19.77■□□□□ 0.76
LRRC28-210ENST00000558879 CCDC62Q6P9F0 684 aa19.77■□□□□ 0.76
LRRC28-210ENST00000558879 SAMD3Q8N6K7 520 aa19.77■□□□□ 0.76
LRRC28-210ENST00000558879 VTI1AQ96AJ9 217 aa19.77■□□□□ 0.76
LRRC28-210ENST00000558879 PIGSQ96S52 555 aa19.77■□□□□ 0.76
LRRC28-210ENST00000558879 IWS1Q96ST2 819 aa19.77■□□□□ 0.76
LRRC28-210ENST00000558879 POLR3EQ9NVU0 708 aa19.77■□□□□ 0.76
LRRC28-210ENST00000558879 MAP3K20Q9NYL2 800 aaKnown RBP19.77■□□□□ 0.76
LRRC28-210ENST00000558879 COL6A3P12111 3177 aa19.77■□□□□ 0.76
LRRC28-210ENST00000558879 SH2B2O14492 632 aaPredicted RBP19.76■□□□□ 0.75
LRRC28-210ENST00000558879 DDAH1O94760 285 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 TTLL4Q14679 1199 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 CREB3L3Q68CJ9 461 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 MFSD5Q6N075 450 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 Q7L0L9 218 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 CATIPQ7Z7H3 387 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 ZNF654Q8IZM8 581 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 COPS5Q92905 334 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 RMDN3Q96TC7 470 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 ANO2Q9NQ90 1003 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 PXMP2Q9NR77 195 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 PCDHA1Q9Y5I3 950 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 PTPRSQ13332 1948 aa19.76■□□□□ 0.75
LRRC28-210ENST00000558879 A6NJR5 290 aa19.75■□□□□ 0.75
LRRC28-210ENST00000558879 PRC1O43663 620 aa19.75■□□□□ 0.75
LRRC28-210ENST00000558879 CFBP00751 764 aa19.75■□□□□ 0.75
LRRC28-210ENST00000558879 PSMC6P62333 389 aa19.75■□□□□ 0.75
LRRC28-210ENST00000558879 FAM109BQ6ICB4 259 aaPredicted RBP19.75■□□□□ 0.75
LRRC28-210ENST00000558879 HOMER1Q86YM7 354 aa19.75■□□□□ 0.75
LRRC28-210ENST00000558879 DEFB123Q8N688 67 aa19.75■□□□□ 0.75
LRRC28-210ENST00000558879 TMEM87BQ96K49 555 aa19.75■□□□□ 0.75
LRRC28-210ENST00000558879 SPZ1Q9BXG8 430 aa19.75■□□□□ 0.75
LRRC28-210ENST00000558879 GPHNQ9NQX3 736 aaPredicted RBP19.75■□□□□ 0.75
LRRC28-210ENST00000558879 B4GALT4O60513 344 aa19.74■□□□□ 0.75
LRRC28-210ENST00000558879 TXNP10599 105 aaKnown RBP19.74■□□□□ 0.75
LRRC28-210ENST00000558879 EIF2AK2P19525 551 aaKnown RBP19.74■□□□□ 0.75
LRRC28-210ENST00000558879 MCM5P33992 734 aa19.74■□□□□ 0.75
LRRC28-210ENST00000558879 TRAF1Q13077 416 aa19.74■□□□□ 0.75
LRRC28-210ENST00000558879 CASC1Q6TDU7 716 aa19.74■□□□□ 0.75
LRRC28-210ENST00000558879 TET1Q8NFU7 2136 aa19.74■□□□□ 0.75
LRRC28-210ENST00000558879 MTMR10Q9NXD2 777 aa19.74■□□□□ 0.75
LRRC28-210ENST00000558879 FRMPD4Q14CM0 1322 aa19.74■□□□□ 0.75
LRRC28-210ENST00000558879 PNMA6FA0A0J9YX94 578 aa19.73■□□□□ 0.75
LRRC28-210ENST00000558879 LIFRP42702 1097 aa19.73■□□□□ 0.75
LRRC28-210ENST00000558879 ARHGAP1Q07960 439 aa19.73■□□□□ 0.75
LRRC28-210ENST00000558879 STXBP2Q15833 593 aa19.73■□□□□ 0.75
LRRC28-210ENST00000558879 ARHGEF16Q5VV41 709 aa19.73■□□□□ 0.75
LRRC28-210ENST00000558879 RNPC3Q96LT9 517 aaKnown RBP19.73■□□□□ 0.75
LRRC28-210ENST00000558879 PDCD2LQ9BRP1 358 aa19.73■□□□□ 0.75
LRRC28-210ENST00000558879 MTG1Q9BT17 334 aaPredicted RBP19.73■□□□□ 0.75
LRRC28-210ENST00000558879 MYL10Q9BUA6 226 aa19.73■□□□□ 0.75
LRRC28-210ENST00000558879 PPP1R12CQ9BZL4 782 aa19.73■□□□□ 0.75
LRRC28-210ENST00000558879 NR3C2P08235 984 aa19.72■□□□□ 0.75
LRRC28-210ENST00000558879 SMARCA1P28370 1054 aa19.72■□□□□ 0.75
LRRC28-210ENST00000558879 SMAD3P84022 425 aaKnown RBP19.72■□□□□ 0.75
LRRC28-210ENST00000558879 PPIGQ13427 754 aaKnown RBP eCLIP19.72■□□□□ 0.75
LRRC28-210ENST00000558879 BRDTQ58F21 947 aaPredicted RBP19.72■□□□□ 0.75
LRRC28-210ENST00000558879 CTCFLQ8NI51 663 aaPredicted RBP19.72■□□□□ 0.75
LRRC28-210ENST00000558879 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.72■□□□□ 0.75
LRRC28-210ENST00000558879 ALDH8A1Q9H2A2 487 aaPredicted RBP19.72■□□□□ 0.75
LRRC28-210ENST00000558879 UMODL1Q5DID0 1318 aa19.72■□□□□ 0.75
LRRC28-210ENST00000558879 CDC45O75419 566 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 EIF3JO75822 258 aaKnown RBP19.71■□□□□ 0.75
LRRC28-210ENST00000558879 RGS20O76081 388 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 MMP3P08254 477 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 MYL3P08590 195 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 CSF2RAP15509 400 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 KIF5BP33176 963 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 PGM5Q15124 567 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 SEPT14Q6ZU15 432 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 SGMS1Q86VZ5 419 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 TMTC2Q8N394 836 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 IL31RAQ8NI17 732 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 EMID1Q96A84 441 aaPredicted RBP19.71■□□□□ 0.75
LRRC28-210ENST00000558879 NOC4LQ9BVI4 516 aaKnown RBP19.71■□□□□ 0.75
LRRC28-210ENST00000558879 HIPK3Q9H422 1215 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 KAT6AQ92794 2004 aa19.71■□□□□ 0.75
LRRC28-210ENST00000558879 CDH23Q9H251 3354 aa19.7■□□□□ 0.74
LRRC28-210ENST00000558879 KPNA6O60684 536 aa19.7■□□□□ 0.74
LRRC28-210ENST00000558879 GH1P01241 217 aa19.7■□□□□ 0.74
LRRC28-210ENST00000558879 HOXA13P31271 388 aaPredicted RBP19.7■□□□□ 0.74
LRRC28-210ENST00000558879 CYP2C18P33260 490 aa19.7■□□□□ 0.74
LRRC28-210ENST00000558879 LY6KQ17RY6 165 aa19.7■□□□□ 0.74
LRRC28-210ENST00000558879 RASIP1Q5U651 963 aa19.7■□□□□ 0.74
LRRC28-210ENST00000558879 C16orf59Q7L2K0 433 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms