RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 CALML3P27482 149 aa18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 TMEM63BQ5T3F8 832 aa18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 BTNL9Q6UXG8 535 aa18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 RNF207Q6ZRF8 634 aa18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 HERC6Q8IVU3 1022 aa18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 NECAB3Q96P71 396 aaPredicted RBP18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 CERS4Q9HA82 394 aa18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 IL17RBQ9NRM6 502 aa18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 TOMM22Q9NS69 142 aa18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDC42BPB-203ENST00000558867 TOP1P11387 765 aaKnown RBP18.8■□□□□ 0.6
CDC42BPB-203ENST00000558867 KCNQ1P51787 676 aa18.8■□□□□ 0.6
CDC42BPB-203ENST00000558867 CTDSPL2Q05D32 466 aa18.8■□□□□ 0.6
CDC42BPB-203ENST00000558867 DNERQ8NFT8 737 aa18.8■□□□□ 0.6
CDC42BPB-203ENST00000558867 PURBQ96QR8 312 aaKnown RBP18.8■□□□□ 0.6
CDC42BPB-203ENST00000558867 A6NJR5 290 aa18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 RFXAPO00287 272 aa18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 TLL1O43897 1013 aa18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 NMT2O60551 498 aa18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 PARNO95453 639 aaKnown RBP18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 SLC16A2P36021 539 aa18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 C8orf34Q49A92 452 aa18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 CAGE1Q8TC20 777 aa18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 VWCEQ96DN2 955 aa18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 ANAPC4Q9UJX5 808 aa18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 PRRC2BQ5JSZ5 2229 aaKnown RBP18.79■□□□□ 0.6
CDC42BPB-203ENST00000558867 NFIBO00712 420 aa18.78■□□□□ 0.6
CDC42BPB-203ENST00000558867 ORC4O43929 436 aa18.78■□□□□ 0.6
CDC42BPB-203ENST00000558867 TXNP10599 105 aaKnown RBP18.78■□□□□ 0.6
CDC42BPB-203ENST00000558867 TAP1Q03518 808 aa18.78■□□□□ 0.6
CDC42BPB-203ENST00000558867 ZBED2Q9BTP6 218 aa18.78■□□□□ 0.6
CDC42BPB-203ENST00000558867 XIRP2A4UGR9 3374 aa18.78■□□□□ 0.6
CDC42BPB-203ENST00000558867 NOVP48745 357 aa18.77■□□□□ 0.6
CDC42BPB-203ENST00000558867 CHMP4BP1P59074 171 aa18.77■□□□□ 0.6
CDC42BPB-203ENST00000558867 TMEM31Q5JXX7 168 aa18.77■□□□□ 0.6
CDC42BPB-203ENST00000558867 TTBK2Q6IQ55 1244 aa18.77■□□□□ 0.6
CDC42BPB-203ENST00000558867 AFAP1L1Q8TED9 768 aa18.77■□□□□ 0.6
CDC42BPB-203ENST00000558867 GPCPD1Q9NPB8 672 aa18.77■□□□□ 0.6
CDC42BPB-203ENST00000558867 LMCD1Q9NZU5 365 aa18.77■□□□□ 0.6
CDC42BPB-203ENST00000558867 RPS6P62753 249 aaKnown RBP18.76■□□□□ 0.59
CDC42BPB-203ENST00000558867 PTGISQ16647 500 aa18.76■□□□□ 0.59
CDC42BPB-203ENST00000558867 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
CDC42BPB-203ENST00000558867 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
CDC42BPB-203ENST00000558867 MAF1Q9H063 256 aa18.76■□□□□ 0.59
CDC42BPB-203ENST00000558867 TCP11L1Q9NUJ3 509 aa18.76■□□□□ 0.59
CDC42BPB-203ENST00000558867 FRMPD2Q68DX3 1309 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 WDR19Q8NEZ3 1342 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 SCN10AQ9Y5Y9 1956 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 EFCAB14O75071 495 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 EDNRBP24530 442 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 GRB10Q13322 594 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 ALX1Q15699 326 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 SLC30A10Q6XR72 485 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 PI4K2BQ8TCG2 481 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 TTC14Q96N46 770 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 TMEM47Q9BQJ4 181 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 INCENPQ9NQS7 918 aa18.75■□□□□ 0.59
CDC42BPB-203ENST00000558867 SCN5AQ14524 2016 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 REV3LO60673 3130 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 FGRP09769 529 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 MX1P20591 662 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 CASTP20810 708 aaKnown RBP18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 RASGRP2Q7LDG7 609 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 RGS22Q8NE09 1264 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 CLEC4DQ8WXI8 215 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 LRFN3Q9BTN0 628 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 HELLSQ9NRZ9 838 aa18.74■□□□□ 0.59
CDC42BPB-203ENST00000558867 LCTP09848 1927 aa18.73■□□□□ 0.59
CDC42BPB-203ENST00000558867 EPOPA6NHQ4 379 aa18.73■□□□□ 0.59
CDC42BPB-203ENST00000558867 GH1P01241 217 aa18.73■□□□□ 0.59
CDC42BPB-203ENST00000558867 SELPP16109 830 aa18.73■□□□□ 0.59
CDC42BPB-203ENST00000558867 GPATCH4Q5T3I0 446 aaKnown RBP18.73■□□□□ 0.59
CDC42BPB-203ENST00000558867 CNKSR3Q6P9H4 555 aa18.73■□□□□ 0.59
CDC42BPB-203ENST00000558867 SESTD1Q86VW0 696 aa18.73■□□□□ 0.59
CDC42BPB-203ENST00000558867 EVI5LQ96CN4 794 aa18.73■□□□□ 0.59
CDC42BPB-203ENST00000558867 EPHX3Q9H6B9 360 aa18.73■□□□□ 0.59
CDC42BPB-203ENST00000558867 TANC1Q9C0D5 1861 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 ABHD14A-ACY1A0A1B0GW23 586 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 PDHBP11177 359 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 PCP11498 1178 aaKnown RBP18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 HOXD11P31277 338 aaPredicted RBP18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 WDR5P61964 334 aaKnown RBP18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 ZNF543Q08ER8 600 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 BMP2KLQ5H9B9 411 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 KRT40Q6A162 431 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 LRRC8DQ7L1W4 858 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 COPS5Q92905 334 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 RAD9AQ99638 391 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 KATNAL1Q9BW62 490 aa18.72■□□□□ 0.59
CDC42BPB-203ENST00000558867 GPR37L1O60883 481 aa18.71■□□□□ 0.59
CDC42BPB-203ENST00000558867 DGKDQ16760 1214 aa18.71■□□□□ 0.59
CDC42BPB-203ENST00000558867 TICAM2Q86XR7 235 aa18.71■□□□□ 0.59
CDC42BPB-203ENST00000558867 MCF2L2Q86YR7 1114 aa18.71■□□□□ 0.59
CDC42BPB-203ENST00000558867 C7orf31Q8N865 590 aa18.71■□□□□ 0.59
CDC42BPB-203ENST00000558867 NSUN6Q8TEA1 469 aaKnown RBP18.71■□□□□ 0.59
CDC42BPB-203ENST00000558867 AFG1LQ8WV93 481 aa18.71■□□□□ 0.59
CDC42BPB-203ENST00000558867 TGS1Q96RS0 853 aaKnown RBP18.71■□□□□ 0.59
CDC42BPB-203ENST00000558867 FGAP02671 866 aa18.7■□□□□ 0.58
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