RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 SPATA31A5Q5VU36 1347 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 SPATA31A7Q8IWB4 1347 aa8.01□□□□□ -1.13
LRRC28-209ENST00000558861 CDK12Q9NYV4 1490 aaPredicted RBP8□□□□□ -1.13
LRRC28-209ENST00000558861 PDPK1O15530 556 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 CBFA2T2O43439 604 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 DYRK3O43781 588 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 CBX7O95931 251 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 IGLV1-40P01703 118 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 EPHX1P07099 455 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 CYP7A1P22680 504 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 CYP27C1Q4G0S4 372 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 HSP90AB2PQ58FF8 381 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 SFRP5Q5T4F7 317 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 MEX3CQ5U5Q3 659 aaKnown RBP8□□□□□ -1.13
LRRC28-209ENST00000558861 MORC1Q86VD1 984 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 CCDC113Q9H0I3 377 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 SPATA31A1Q5TZJ5 1347 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 WDR17Q8IZU2 1322 aa8□□□□□ -1.13
LRRC28-209ENST00000558861 LTN1O94822 1766 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 DISP2A7MBM2 1401 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 SHOXO15266 292 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 SUSD5O60279 629 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 PPP2R1AP30153 589 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 CYP27A1Q02318 531 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 SNW1Q13573 536 aaKnown RBP7.99□□□□□ -1.13
LRRC28-209ENST00000558861 RASGRF1Q13972 1273 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 ZNF772Q68DY9 489 aaPredicted RBP7.99□□□□□ -1.13
LRRC28-209ENST00000558861 FAM181AQ8N9Y4 354 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 SMARCC1Q92922 1105 aaPredicted RBP7.99□□□□□ -1.13
LRRC28-209ENST00000558861 MRFAP1L1Q96HT8 127 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 Q96M66 194 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 FBXL18Q96ME1 805 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 SUSD2Q9UGT4 822 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 GTF2IRD1Q9UHL9 959 aa7.99□□□□□ -1.13
LRRC28-209ENST00000558861 CRB1P82279 1406 aa7.98□□□□□ -1.13
LRRC28-209ENST00000558861 TNNT2P45379 298 aaPredicted RBP7.98□□□□□ -1.13
LRRC28-209ENST00000558861 MTHFSP49914 203 aa7.98□□□□□ -1.13
LRRC28-209ENST00000558861 AUHQ13825 339 aaKnown RBP7.98□□□□□ -1.13
LRRC28-209ENST00000558861 NBPF9Q3BBW0 867 aa7.98□□□□□ -1.13
LRRC28-209ENST00000558861 DUSP27Q5VZP5 1158 aa7.98□□□□□ -1.13
LRRC28-209ENST00000558861 HEATR6Q6AI08 1181 aaKnown RBP7.98□□□□□ -1.13
LRRC28-209ENST00000558861 EEPD1Q7L9B9 569 aa7.98□□□□□ -1.13
LRRC28-209ENST00000558861 LRP10Q7Z4F1 713 aa7.98□□□□□ -1.13
LRRC28-209ENST00000558861 OSBPL1AQ9BXW6 950 aa7.98□□□□□ -1.13
LRRC28-209ENST00000558861 KLHL25Q9H0H3 589 aa7.98□□□□□ -1.13
LRRC28-209ENST00000558861 PRKRIP1Q9H875 184 aaPredicted RBP7.98□□□□□ -1.13
LRRC28-209ENST00000558861 ATG3Q9NT62 314 aa7.98□□□□□ -1.13
LRRC28-209ENST00000558861 TRPC5Q9UL62 973 aaPredicted RBP7.98□□□□□ -1.13
LRRC28-209ENST00000558861 FAM208AQ9UK61 1670 aaKnown RBP7.98□□□□□ -1.13
LRRC28-209ENST00000558861 RGPD5Q99666 1765 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 MAP2P11137 1827 aaKnown RBP7.97□□□□□ -1.13
LRRC28-209ENST00000558861 IGF2BP3O00425 579 aaKnown RBP eCLIP7.97□□□□□ -1.13
LRRC28-209ENST00000558861 GSC2O15499 205 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 ITIH2P19823 946 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 IL13P35225 146 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 AMPHP49418 695 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 EIF4A2Q14240 407 aaKnown RBP7.97□□□□□ -1.13
LRRC28-209ENST00000558861 RALBP1Q15311 655 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 SLC10A6Q3KNW5 377 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 MTERF2Q49AM1 385 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 C22orf34Q6ZV56 151 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 SPATC1Q76KD6 591 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 NOP9Q86U38 636 aaKnown RBP7.97□□□□□ -1.13
LRRC28-209ENST00000558861 JAZF1Q86VZ6 243 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 C7orf61Q8IZ16 206 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 MFSD4AQ8N468 514 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 DTWD2Q8NBA8 298 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 COX4I2Q96KJ9 171 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 FGD4Q96M96 766 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 DNAJC7Q99615 494 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 METTL22Q9BUU2 404 aaPredicted RBP7.97□□□□□ -1.13
LRRC28-209ENST00000558861 LRRC4CQ9HCJ2 640 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 APEX2Q9UBZ4 518 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 ZNF451Q9Y4E5 1061 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 CAPN6Q9Y6Q1 641 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 THSD7AQ9UPZ6 1657 aa7.97□□□□□ -1.13
LRRC28-209ENST00000558861 RGS12O14924 1447 aa7.96□□□□□ -1.13
LRRC28-209ENST00000558861 RGPD1P0DJD0 1748 aa7.96□□□□□ -1.14
LRRC28-209ENST00000558861 GNAT3A8MTJ3 354 aa7.96□□□□□ -1.14
LRRC28-209ENST00000558861 ZNF865P0CJ78 1059 aaPredicted RBP7.96□□□□□ -1.14
LRRC28-209ENST00000558861 RBM6P78332 1123 aaKnown RBP7.96□□□□□ -1.14
LRRC28-209ENST00000558861 IFRD2Q12894 506 aaPredicted RBP7.96□□□□□ -1.14
LRRC28-209ENST00000558861 ZDHHC13Q8IUH4 622 aa7.96□□□□□ -1.14
LRRC28-209ENST00000558861 PRDM14Q9GZV8 571 aa7.96□□□□□ -1.14
LRRC28-209ENST00000558861 GP6Q9HCN6 339 aa7.96□□□□□ -1.14
LRRC28-209ENST00000558861 PFDN2Q9UHV9 154 aa7.96□□□□□ -1.14
LRRC28-209ENST00000558861 PCDHB12Q9Y5F1 795 aa7.96□□□□□ -1.14
LRRC28-209ENST00000558861 IGSF1Q8N6C5 1336 aa7.96□□□□□ -1.14
LRRC28-209ENST00000558861 KDRP35968 1356 aa7.96□□□□□ -1.14
LRRC28-209ENST00000558861 ANKRD34BA5PLL1 514 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 DIAPH1O60610 1272 aaKnown RBP7.95□□□□□ -1.14
LRRC28-209ENST00000558861 FURINP09958 794 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 CD247P20963 164 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 KIR3DL1P43629 444 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 OXCT1P55809 520 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 TNK2Q07912 1038 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 TMC3Q7Z5M5 1100 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 TCP11L2Q8N4U5 519 aa7.95□□□□□ -1.14
LRRC28-209ENST00000558861 ST13P5Q8NFI4 369 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-209ENST00000558861 ADCY4Q8NFM4 1077 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms