RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 COL20A1Q9P218 1284 aa18.01■□□□□ 0.47
CSHL1-208ENST00000558609 OPLAHO14841 1288 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 NKRFO15226 690 aaKnown RBP eCLIP18■□□□□ 0.47
CSHL1-208ENST00000558609 CYTH3O43739 400 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 ITGB8P26012 769 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 HSD17B4P51659 736 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 TMTC2Q8N394 836 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 SAMD3Q8N6K7 520 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 SLC43A3Q8NBI5 491 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 TMEM87BQ96K49 555 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 IWS1Q96ST2 819 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 RMDN3Q96TC7 470 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 SEZ6LQ9BYH1 1024 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 GPHNQ9NQX3 736 aaPredicted RBP18■□□□□ 0.47
CSHL1-208ENST00000558609 MAP3K20Q9NYL2 800 aaKnown RBP18■□□□□ 0.47
CSHL1-208ENST00000558609 PCDHA1Q9Y5I3 950 aa18■□□□□ 0.47
CSHL1-208ENST00000558609 BAZ2BQ9UIF8 2168 aaKnown RBP18■□□□□ 0.47
CSHL1-208ENST00000558609 CDC45O75419 566 aa17.99■□□□□ 0.47
CSHL1-208ENST00000558609 DDAH1O94760 285 aa17.99■□□□□ 0.47
CSHL1-208ENST00000558609 PPP2R5BQ15173 497 aa17.99■□□□□ 0.47
CSHL1-208ENST00000558609 ZNF654Q8IZM8 581 aa17.99■□□□□ 0.47
CSHL1-208ENST00000558609 PIGSQ96S52 555 aa17.99■□□□□ 0.47
CSHL1-208ENST00000558609 PNMA6FA0A0J9YX94 578 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 SH2B2O14492 632 aaPredicted RBP17.98■□□□□ 0.47
CSHL1-208ENST00000558609 CFBP00751 764 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 RAG1P15918 1043 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 SMARCA1P28370 1054 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 LIFRP42702 1097 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 ITGA7Q13683 1181 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 COL9A3Q14050 684 aaPredicted RBP17.98■□□□□ 0.47
CSHL1-208ENST00000558609 RNF20Q5VTR2 975 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 FAM126BQ8IXS8 530 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 COL25A1Q9BXS0 654 aaPredicted RBP17.98■□□□□ 0.47
CSHL1-208ENST00000558609 TBX21Q9UL17 535 aa17.98■□□□□ 0.47
CSHL1-208ENST00000558609 LAMA2P24043 3122 aaKnown RBP17.98■□□□□ 0.47
CSHL1-208ENST00000558609 TXNP10599 105 aaKnown RBP17.97■□□□□ 0.47
CSHL1-208ENST00000558609 KIF5BP33176 963 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 CPT1AP50416 773 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 TTLL4Q14679 1199 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 STXBP2Q15833 593 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 ARHGEF16Q5VV41 709 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 CCDC62Q6P9F0 684 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 OR6J1Q8NGC5 347 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
CSHL1-208ENST00000558609 PXMP2Q9NR77 195 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 POLR3EQ9NVU0 708 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 VCANP13611 3396 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 GRIN2DO15399 1336 aa17.97■□□□□ 0.47
CSHL1-208ENST00000558609 TLR3O15455 904 aaKnown RBP17.96■□□□□ 0.47
CSHL1-208ENST00000558609 ARIH2O95376 493 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 TIMP1P01033 207 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 CD4P01730 458 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 NR3C2P08235 984 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 GNAQP50148 359 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 SHHQ15465 462 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 TSGA10IPQ3SY00 556 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 NFXL1Q6ZNB6 911 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 LZTS2Q9BRK4 669 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 MYL10Q9BUA6 226 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 SPZ1Q9BXG8 430 aa17.96■□□□□ 0.47
CSHL1-208ENST00000558609 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
CSHL1-208ENST00000558609 A6NJR5 290 aa17.95■□□□□ 0.46
CSHL1-208ENST00000558609 EIF3JO75822 258 aaKnown RBP17.95■□□□□ 0.46
CSHL1-208ENST00000558609 CALM1P0DP23 149 aa17.95■□□□□ 0.46
CSHL1-208ENST00000558609 CALM2P0DP24 149 aa17.95■□□□□ 0.46
CSHL1-208ENST00000558609 CALM3P0DP25 149 aa17.95■□□□□ 0.46
CSHL1-208ENST00000558609 EIF2AK2P19525 551 aaKnown RBP17.95■□□□□ 0.46
CSHL1-208ENST00000558609 PURAQ00577 322 aaKnown RBP17.95■□□□□ 0.46
CSHL1-208ENST00000558609 BRDTQ58F21 947 aaPredicted RBP17.95■□□□□ 0.46
CSHL1-208ENST00000558609 C9orf50Q5SZB4 431 aa17.95■□□□□ 0.46
CSHL1-208ENST00000558609 COPS5Q92905 334 aa17.95■□□□□ 0.46
CSHL1-208ENST00000558609 GUCD1Q96NT3 240 aa17.95■□□□□ 0.46
CSHL1-208ENST00000558609 GCOM1H8Y6P7 765 aaPredicted RBP17.94■□□□□ 0.46
CSHL1-208ENST00000558609 KPNA6O60684 536 aa17.94■□□□□ 0.46
CSHL1-208ENST00000558609 POLR2MP0CAP2 368 aa17.94■□□□□ 0.46
CSHL1-208ENST00000558609 HOXA13P31271 388 aaPredicted RBP17.94■□□□□ 0.46
CSHL1-208ENST00000558609 PSMC6P62333 389 aa17.94■□□□□ 0.46
CSHL1-208ENST00000558609 FPGSQ05932 587 aa17.94■□□□□ 0.46
CSHL1-208ENST00000558609 MFSD5Q6N075 450 aa17.94■□□□□ 0.46
CSHL1-208ENST00000558609 SEPT14Q6ZU15 432 aa17.94■□□□□ 0.46
CSHL1-208ENST00000558609 SGMS1Q86VZ5 419 aa17.94■□□□□ 0.46
CSHL1-208ENST00000558609 RRP36Q96EU6 259 aaKnown RBP17.94■□□□□ 0.46
CSHL1-208ENST00000558609 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
CSHL1-208ENST00000558609 PDCD2LQ9BRP1 358 aa17.94■□□□□ 0.46
CSHL1-208ENST00000558609 MYL3P08590 195 aa17.93■□□□□ 0.46
CSHL1-208ENST00000558609 EPHB4P54760 987 aa17.93■□□□□ 0.46
CSHL1-208ENST00000558609 EXOSC10Q01780 885 aaKnown RBP17.93■□□□□ 0.46
CSHL1-208ENST00000558609 VSIG10LQ86VR7 867 aa17.93■□□□□ 0.46
CSHL1-208ENST00000558609 RASEFQ8IZ41 740 aa17.93■□□□□ 0.46
CSHL1-208ENST00000558609 MTG1Q9BT17 334 aaPredicted RBP17.93■□□□□ 0.46
CSHL1-208ENST00000558609 LRRC2Q9BYS8 371 aa17.93■□□□□ 0.46
CSHL1-208ENST00000558609 SLC12A7Q9Y666 1083 aa17.93■□□□□ 0.46
CSHL1-208ENST00000558609 KIAA1217Q5T5P2 1943 aa17.93■□□□□ 0.46
CSHL1-208ENST00000558609 PLEKHA8P1O95397 391 aa17.92■□□□□ 0.46
CSHL1-208ENST00000558609 GH1P01241 217 aa17.92■□□□□ 0.46
CSHL1-208ENST00000558609 NEFLP07196 543 aa17.92■□□□□ 0.46
CSHL1-208ENST00000558609 KRT32Q14532 448 aa17.92■□□□□ 0.46
CSHL1-208ENST00000558609 LY6KQ17RY6 165 aa17.92■□□□□ 0.46
CSHL1-208ENST00000558609 FAM109BQ6ICB4 259 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms