RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 BAIAP2L1Q9UHR4 511 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 ERICH2A1L162 156 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 SMNDC1O75940 238 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 ALADP13716 330 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 HSD17B3P37058 310 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 SSR1P43307 286 aaKnown RBP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 TRAPPC10P48553 1259 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 HSPA2P54652 639 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 TNNC1P63316 161 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 ZNF844Q08AG5 666 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 MYO1EQ12965 1108 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 SLC39A6Q13433 755 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 ITIH4Q14624 930 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 CAPRIN2Q6IMN6 1127 aaKnown RBP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 HIBCHQ6NVY1 386 aaPredicted RBP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 THEMISQ8N1K5 641 aaPredicted RBP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 CCDC63Q8NA47 563 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 FANCBQ8NB91 859 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 STAMBPL1Q96FJ0 436 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 ACSBG1Q96GR2 724 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 SLC39A2Q9NP94 309 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 NOP53Q9NZM5 478 aaKnown RBP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 ARHGAP20Q9P2F6 1191 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 ESYT3A0FGR9 886 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 CES2O00748 559 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 SNUPNO95149 360 aaKnown RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 ANP32DO95626 131 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 PPP1R2P41236 205 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 PMS1P54277 932 aaKnown RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 PTGDRQ13258 359 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 PPP1R7Q15435 360 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 FKBP15Q5T1M5 1219 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 AKNAD1Q5T1N1 836 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 MIS18BP1Q6P0N0 1132 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 CPLX4Q7Z7G2 160 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 ANKLE2Q86XL3 938 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 ANKS4BQ8N8V4 417 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 CCDC197Q8NCU1 140 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 MICAL1Q8TDZ2 1067 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 TNFRSF25Q93038 417 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 NDST4Q9H3R1 872 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 BICDL2A1A5D9 508 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 ZSCAN5CA6NGD5 496 aaPredicted RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 NCK2O43639 380 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 RHOBTB3O94955 611 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 MAGEA1P43355 309 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 ZNF174Q15697 407 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 EARS2Q5JPH6 523 aaKnown RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 KIRREL3Q8IZU9 778 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 GIMAP8Q8ND71 665 aaPredicted RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 TBC1D31Q96DN5 1066 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 CHMP6Q96FZ7 201 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 ZNF496Q96IT1 587 aaPredicted RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 PCMTD1Q96MG8 357 aaPredicted RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 ANKRD27Q96NW4 1050 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 PSMB7Q99436 277 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 UBAC1Q9BSL1 405 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 PUS3Q9BZE2 481 aaKnown RBP12.37□□□□□ -0.43
PCAT29-201ENST00000558411 MAPK8IP1Q9UQF2 711 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 TBX22Q9Y458 520 aa12.37□□□□□ -0.43
PCAT29-201ENST00000558411 BHMG1C9JSJ3 638 aaPredicted RBP12.36□□□□□ -0.43
PCAT29-201ENST00000558411 ASAP2O43150 1006 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 AKR1B10O60218 316 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 SKAP2O75563 359 aaPredicted RBP12.36□□□□□ -0.43
PCAT29-201ENST00000558411 PECAM1P16284 738 aaPredicted RBP12.36□□□□□ -0.43
PCAT29-201ENST00000558411 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
PCAT29-201ENST00000558411 EIF4A3P38919 411 aaKnown RBP12.36□□□□□ -0.43
PCAT29-201ENST00000558411 PRPHP41219 470 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 KLK7P49862 253 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 TRAF1Q13077 416 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 ARL6IP4Q66PJ3 421 aaKnown RBP12.36□□□□□ -0.43
PCAT29-201ENST00000558411 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 CACNA2D4Q7Z3S7 1137 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 C14orf37Q86TY3 774 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 CSGALNACT2Q8N6G5 542 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 CNKSR1Q969H4 720 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 MS4A14Q96JA4 679 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
PCAT29-201ENST00000558411 KRT12Q99456 494 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 DUSP9Q99956 384 aaKnown RBP12.36□□□□□ -0.43
PCAT29-201ENST00000558411 RTL9Q8NET4 1388 aa12.36□□□□□ -0.43
PCAT29-201ENST00000558411 EME2A4GXA9 379 aaPredicted RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 F8W031 263 aaPredicted RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 RBAK-RBAKDNI3L0D1 243 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 LUC7L3O95232 432 aaKnown RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 PLEKP08567 350 aaPredicted RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 TMOD1P28289 359 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 CTNNA1P35221 906 aaKnown RBP12.35□□□□□ -0.43
PCAT29-201ENST00000558411 ODF2Q5BJF6 829 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 MIIPQ5JXC2 388 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
PCAT29-201ENST00000558411 MFSD6Q6ZSS7 791 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms