RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 ANAPC16Q96DE5 110 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 INTS4Q96HW7 963 aaKnown RBP5.44□□□□□ -1.54
LRRC28-205ENST00000558248 SLC26A8Q96RN1 970 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 HAUS7Q99871 368 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 G6PC3Q9BUM1 346 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 WHRNQ9P202 907 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 DNMT1P26358 1616 aaKnown RBP5.44□□□□□ -1.54
LRRC28-205ENST00000558248 A2ML1A8K2U0 1454 aa5.44□□□□□ -1.54
LRRC28-205ENST00000558248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.43□□□□□ -1.54
LRRC28-205ENST00000558248 FAM135BQ49AJ0 1406 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 STRCP1A6NGW2 1772 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 A0A087WZG4 1122 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 WTIPA6NIX2 430 aaPredicted RBP5.43□□□□□ -1.54
LRRC28-205ENST00000558248 PSPNO60542 156 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 PEX14O75381 377 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 PPM1BO75688 479 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 TSPAN15O95858 294 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 SSBP05455 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
LRRC28-205ENST00000558248 NAT2P11245 290 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 ZNF445P59923 1031 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 POU4F1Q01851 419 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 MESP2Q0VG99 397 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 TIGD5Q53EQ6 642 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 OLFML2BQ68BL8 750 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 GALNT18Q6P9A2 607 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 CYP2R1Q6VVX0 501 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 ADAT2Q7Z6V5 191 aaKnown RBP5.43□□□□□ -1.54
LRRC28-205ENST00000558248 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 BRF1Q92994 677 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 SHDQ96IW2 340 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 HHIPL1Q96JK4 782 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 CCDC136Q96JN2 1154 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 UBA5Q9GZZ9 404 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 TMX1Q9H3N1 280 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 NOL6Q9H6R4 1146 aaKnown RBP5.43□□□□□ -1.54
LRRC28-205ENST00000558248 SP110Q9HB58 689 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 CRTAC1Q9NQ79 661 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 ERVK13-1Q9NX77 482 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 CHPF2Q9P2E5 772 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 FAN1Q9Y2M0 1017 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 GPR55Q9Y2T6 319 aaPredicted RBP5.43□□□□□ -1.54
LRRC28-205ENST00000558248 ZNF451Q9Y4E5 1061 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 MROH2AA6NES4 1674 aa5.43□□□□□ -1.54
LRRC28-205ENST00000558248 NPHP4O75161 1426 aaPredicted RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 A0A1W2PQ27 194 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 A0A1W2PQ45 241 aaPredicted RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 A0A1W2PQ64 194 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 A0A1W2PQC6 194 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 A0A1W2PQD8 194 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 A0A1W2PQH9 124 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 A0A1W2PQY0 241 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 OR14I1A6ND48 311 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 STK10O94804 968 aaKnown RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 GSTM1P09488 218 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 TMEM253P0C7T8 217 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 ATF4P18848 351 aaPredicted RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 IRX6P78412 446 aaPredicted RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 RBM10P98175 930 aaKnown RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 BMS1Q14692 1282 aaKnown RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 ZNF124Q15973 351 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 ADGRF1Q5T601 910 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 ZNF772Q68DY9 489 aaPredicted RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 ZPBP2Q6X784 338 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 JAMLQ86YT9 394 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 TEX2Q8IWB9 1127 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 THEMISQ8N1K5 641 aaPredicted RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 MRFAP1L1Q96HT8 127 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 ZDHHC15Q96MV8 337 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 AP5S1Q9NUS5 200 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 EBF1Q9UH73 591 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 DIS3Q9Y2L1 958 aaKnown RBP5.42□□□□□ -1.54
LRRC28-205ENST00000558248 PRXQ9BXM0 1461 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 LTBP3Q9NS15 1303 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 SRCAPQ6ZRS2 3230 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 SAMD9Q5K651 1589 aa5.42□□□□□ -1.54
LRRC28-205ENST00000558248 CLTCQ00610 1675 aaKnown RBP5.41□□□□□ -1.54
LRRC28-205ENST00000558248 DBX1A6NMT0 343 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 FADS2P1A8MWK0 482 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 H0Y8X5 98 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 ENPP3O14638 875 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 U2SURPO15042 1029 aaKnown RBP5.41□□□□□ -1.54
LRRC28-205ENST00000558248 MAP4K4O95819 1239 aaPredicted RBP5.41□□□□□ -1.54
LRRC28-205ENST00000558248 S100BP04271 92 aaPredicted RBP5.41□□□□□ -1.54
LRRC28-205ENST00000558248 CD3EP07766 207 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 CASP7P55210 303 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 RALBP1Q15311 655 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 TNNI3KQ59H18 835 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 HLA-DQA1Q5Y7H0 255 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 TMEM132EQ6IEE7 984 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 VHLLQ6RSH7 139 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 ZNF605Q86T29 641 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 NLRX1Q86UT6 975 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 SIRT2Q8IXJ6 389 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 CRACR2BQ8N4Y2 399 aaPredicted RBP5.41□□□□□ -1.54
LRRC28-205ENST00000558248 IRF2BPLQ9H1B7 796 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 PCDHB10Q9UN67 800 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 ARHGAP5Q13017 1502 aa5.41□□□□□ -1.54
LRRC28-205ENST00000558248 CDK13Q14004 1512 aaKnown RBP5.41□□□□□ -1.54
LRRC28-205ENST00000558248 RNF17Q9BXT8 1623 aaKnown RBP5.41□□□□□ -1.54
LRRC28-205ENST00000558248 POLR1AO95602 1720 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms