RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 C1orf53Q5VUE5 145 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 ARMCX2Q7L311 632 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 ENAHQ8N8S7 591 aaPredicted RBP13.32□□□□□ -0.28
LINC00648-204ENST00000557749 PCSK9Q8NBP7 692 aaKnown RBP13.32□□□□□ -0.28
LINC00648-204ENST00000557749 NUP133Q8WUM0 1156 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 MTA3Q9BTC8 594 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 ZSWIM5Q9P217 1185 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 TACC3Q9Y6A5 838 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 FRMPD2Q68DX3 1309 aaPredicted RBP13.32□□□□□ -0.28
LINC00648-204ENST00000557749 SSTR3P32745 418 aaPredicted RBP13.31□□□□□ -0.28
LINC00648-204ENST00000557749 BMP8BP34820 402 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 LRRC41Q15345 812 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 NSMFQ6X4W1 530 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 MCF2L2Q86YR7 1114 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 RGS22Q8NE09 1264 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 SEZ6LQ9BYH1 1024 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 VTA1Q9NP79 307 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 PHF24Q9UPV7 400 aa13.31□□□□□ -0.28
LINC00648-204ENST00000557749 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
LINC00648-204ENST00000557749 ZEB2O60315 1214 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 SNAI1O95863 264 aaPredicted RBP13.3□□□□□ -0.28
LINC00648-204ENST00000557749 CST5P28325 142 aaPredicted RBP13.3□□□□□ -0.28
LINC00648-204ENST00000557749 SLC16A2P36021 539 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 PRAMEF19Q5SWL8 479 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 GJC2Q5T442 439 aaPredicted RBP13.3□□□□□ -0.28
LINC00648-204ENST00000557749 CCDC144CPQ8IYA2 1237 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 MAP4K1Q92918 833 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 LBHD1Q9BQE6 289 aaPredicted RBP13.3□□□□□ -0.28
LINC00648-204ENST00000557749 ZKSCAN3Q9BRR0 538 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 HCSTQ9UBK5 93 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 ABCB11O95342 1321 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 MROH7Q68CQ1 1323 aa13.3□□□□□ -0.28
LINC00648-204ENST00000557749 PTPDC1A2A3K4 754 aa13.29□□□□□ -0.28
LINC00648-204ENST00000557749 CYP21A2P08686 494 aa13.29□□□□□ -0.28
LINC00648-204ENST00000557749 SNX17Q15036 470 aa13.29□□□□□ -0.28
LINC00648-204ENST00000557749 TTBK2Q6IQ55 1244 aa13.29□□□□□ -0.28
LINC00648-204ENST00000557749 RNF207Q6ZRF8 634 aa13.29□□□□□ -0.28
LINC00648-204ENST00000557749 TMTC2Q8N394 836 aa13.29□□□□□ -0.28
LINC00648-204ENST00000557749 SAMD3Q8N6K7 520 aa13.29□□□□□ -0.28
LINC00648-204ENST00000557749 GLT1D1Q96MS3 346 aa13.29□□□□□ -0.28
LINC00648-204ENST00000557749 MAP3K20Q9NYL2 800 aaKnown RBP13.29□□□□□ -0.28
LINC00648-204ENST00000557749 MRPL11Q9Y3B7 192 aaKnown RBP13.29□□□□□ -0.28
LINC00648-204ENST00000557749 Q9Y3F1 56 aa13.29□□□□□ -0.28
LINC00648-204ENST00000557749 IFIT3O14879 490 aaKnown RBP13.28□□□□□ -0.28
LINC00648-204ENST00000557749 ADAMTS4O75173 837 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 CABYRO75952 493 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 RTP1P59025 263 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 WTAPQ15007 396 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 CDC37Q16543 378 aaPredicted RBP13.28□□□□□ -0.28
LINC00648-204ENST00000557749 LRRC26Q2I0M4 334 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 CCDC144BQ3MJ40 725 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 BRDTQ58F21 947 aaPredicted RBP13.28□□□□□ -0.28
LINC00648-204ENST00000557749 ANO1Q5XXA6 986 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 IQSEC1Q6DN90 963 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 SLC39A5Q6ZMH5 540 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 CATIPQ7Z7H3 387 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 MORC4Q8TE76 937 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 CCDC136Q96JN2 1154 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 AP5M1Q9H0R1 490 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 ELP1O95163 1332 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 SYNRGQ9UMZ2 1314 aa13.28□□□□□ -0.28
LINC00648-204ENST00000557749 ALPK3Q96L96 1907 aa13.27□□□□□ -0.28
LINC00648-204ENST00000557749 E7EWF7 191 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 NKRFO15226 690 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC00648-204ENST00000557749 C6orf222P0C671 652 aaPredicted RBP13.27□□□□□ -0.29
LINC00648-204ENST00000557749 TAL1P17542 331 aaPredicted RBP13.27□□□□□ -0.29
LINC00648-204ENST00000557749 KIF5BP33176 963 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 ADCYAP1R1P41586 468 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 GJA9P57773 515 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 NKX3-2P78367 333 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 CNTN2Q02246 1040 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 TNFAIP2Q03169 654 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 MUM1L1Q5H9M0 696 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 NOL8Q76FK4 1167 aaKnown RBP13.27□□□□□ -0.29
LINC00648-204ENST00000557749 FBXO11Q86XK2 927 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 MAP3K14Q99558 947 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 GDF15Q99988 308 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 AMNQ9BXJ7 453 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 UPF3AQ9H1J1 476 aaKnown RBP13.27□□□□□ -0.29
LINC00648-204ENST00000557749 PRO3102Q9H379 93 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 STARD7Q9NQZ5 370 aa13.27□□□□□ -0.29
LINC00648-204ENST00000557749 ZMYND8Q9ULU4 1186 aaPredicted RBP13.27□□□□□ -0.29
LINC00648-204ENST00000557749 RBM8AQ9Y5S9 174 aaKnown RBP13.27□□□□□ -0.29
LINC00648-204ENST00000557749 A0A1W2PQ45 241 aaPredicted RBP13.26□□□□□ -0.29
LINC00648-204ENST00000557749 A0A1W2PQY0 241 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 DDAH1O94760 285 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 PGK1P00558 417 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 CFHP08603 1231 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 GOLGA8HP0CJ92 632 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 CALM1P0DP23 149 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 CALM2P0DP24 149 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 CALM3P0DP25 149 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 MCM5P33992 734 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 GCGRP47871 477 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 ALDH5A1P51649 535 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms