RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 GNRH1P01148 92 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 HOXC6P09630 235 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 IFNAR1P17181 557 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 FLT3LGP49771 235 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 GNAQP50148 359 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 PPP2R5BQ15173 497 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 ANKRD1Q15327 319 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 COL13A1Q5TAT6 717 aaPredicted RBP10.45□□□□□ -0.74
CHD8-214ENST00000557727 NCAPG2Q86XI2 1143 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 ABRAQ8N0Z2 381 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 CHST13Q8NET6 341 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 GTF3C6Q969F1 213 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 A1CFQ9NQ94 594 aaKnown RBP10.45□□□□□ -0.74
CHD8-214ENST00000557727 RTN4Q9NQC3 1192 aaKnown RBP10.45□□□□□ -0.74
CHD8-214ENST00000557727 RNF146Q9NTX7 359 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 CCPG1Q9ULG6 757 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 PTPN22Q9Y2R2 807 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 TRIM17Q9Y577 477 aa10.45□□□□□ -0.74
CHD8-214ENST00000557727 FMNL1O95466 1100 aaPredicted RBP10.44□□□□□ -0.74
CHD8-214ENST00000557727 ALAS1P13196 640 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 ADORA2AP29274 412 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 COPB2P35606 906 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 STK3Q13188 491 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 IRF5Q13568 498 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 TKFCQ3LXA3 575 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 PPP1R18Q6NYC8 613 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 SYNE3Q6ZMZ3 975 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 NOL8Q76FK4 1167 aaKnown RBP10.44□□□□□ -0.74
CHD8-214ENST00000557727 FBXO11Q86XK2 927 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 HOMER1Q86YM7 354 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 NECAB1Q8N987 351 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 NPLOC4Q8TAT6 608 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 TBC1D5Q92609 795 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 PHKBQ93100 1093 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 TRERF1Q96PN7 1200 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 AMNQ9BXJ7 453 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 ACAD9Q9H845 621 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 HOMER2Q9NSB8 354 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 FLRT1Q9NZU1 646 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 LIMCH1Q9UPQ0 1083 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 PTCH2Q9Y6C5 1203 aa10.44□□□□□ -0.74
CHD8-214ENST00000557727 ABCB11O95342 1321 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 ADAMTS3O15072 1205 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 PRPF3O43395 683 aaKnown RBP10.43□□□□□ -0.74
CHD8-214ENST00000557727 STRNO43815 780 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 PPFIA3O75145 1194 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 PGK2P07205 417 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 XRCC5P13010 732 aaKnown RBP10.43□□□□□ -0.74
CHD8-214ENST00000557727 FDPSP14324 419 aaKnown RBP10.43□□□□□ -0.74
CHD8-214ENST00000557727 MAP2K5Q13163 448 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 KIF22Q14807 665 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 CCL14Q16627 93 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 ZNF792Q3KQV3 632 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 USH1GQ495M9 461 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 WWC2Q6AWC2 1192 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 PADI6Q6TGC4 694 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 SLC30A10Q6XR72 485 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 FAM133AQ8N9E0 248 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 RGS22Q8NE09 1264 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 NSUN7Q8NE18 718 aaKnown RBP10.43□□□□□ -0.74
CHD8-214ENST00000557727 SOCS4Q8WXH5 440 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 PIBF1Q8WXW3 757 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 TRIB2Q92519 343 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 ZNF516Q92618 1163 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 COA7Q96BR5 231 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 RRP36Q96EU6 259 aaKnown RBP10.43□□□□□ -0.74
CHD8-214ENST00000557727 PURBQ96QR8 312 aaKnown RBP10.43□□□□□ -0.74
CHD8-214ENST00000557727 MMP19Q99542 508 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 RNF26Q9BY78 433 aaPredicted RBP10.43□□□□□ -0.74
CHD8-214ENST00000557727 CYP39A1Q9NYL5 469 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 COL20A1Q9P218 1284 aa10.43□□□□□ -0.74
CHD8-214ENST00000557727 NAP1L2Q9ULW6 460 aaPredicted RBP10.43□□□□□ -0.74
CHD8-214ENST00000557727 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
CHD8-214ENST00000557727 CCDC196A0A1B0GTZ2 297 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 STXBP3O00186 592 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 DHX16O60231 1041 aaKnown RBP10.42□□□□□ -0.74
CHD8-214ENST00000557727 GFRA3O60609 400 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 RNF40O75150 1001 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 FCER1AP12319 257 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 HSD17B4P51659 736 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 PRMT2P55345 433 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 CNTN2Q02246 1040 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 PFKFB3Q16875 520 aaPredicted RBP10.42□□□□□ -0.74
CHD8-214ENST00000557727 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
CHD8-214ENST00000557727 FBXO46Q6PJ61 603 aaPredicted RBP10.42□□□□□ -0.74
CHD8-214ENST00000557727 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.74
CHD8-214ENST00000557727 AIFM3Q96NN9 605 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 APBA2Q99767 749 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 NUDT12Q9BQG2 462 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 PRKD2Q9BZL6 878 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 MCOLN1Q9GZU1 580 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
CHD8-214ENST00000557727 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.42□□□□□ -0.74
CHD8-214ENST00000557727 FBXO40Q9UH90 709 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 PCDHA1Q9Y5I3 950 aa10.42□□□□□ -0.74
CHD8-214ENST00000557727 DDX49Q9Y6V7 483 aaKnown RBP10.42□□□□□ -0.74
CHD8-214ENST00000557727 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms