RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 EXTL1Q92935 676 aa5.62□□□□□ -1.51
FOXN3-217ENST00000557572 SRRTQ9BXP5 876 aaKnown RBP5.62□□□□□ -1.51
FOXN3-217ENST00000557572 L2HGDHQ9H9P8 463 aa5.62□□□□□ -1.51
FOXN3-217ENST00000557572 P4HBP07237 508 aaKnown RBP5.61□□□□□ -1.51
FOXN3-217ENST00000557572 MPP2Q14168 576 aa5.61□□□□□ -1.51
FOXN3-217ENST00000557572 OVOS1Q6IE37 1185 aa5.61□□□□□ -1.51
FOXN3-217ENST00000557572 TMEM192Q8IY95 271 aa5.61□□□□□ -1.51
FOXN3-217ENST00000557572 SIT1Q9Y3P8 196 aa5.61□□□□□ -1.51
FOXN3-217ENST00000557572 PKN3Q6P5Z2 889 aa5.6□□□□□ -1.51
FOXN3-217ENST00000557572 GLCCI1Q86VQ1 547 aa5.6□□□□□ -1.51
FOXN3-217ENST00000557572 LDLRAD3Q86YD5 345 aa5.6□□□□□ -1.51
FOXN3-217ENST00000557572 FBXO27Q8NI29 283 aa5.6□□□□□ -1.51
FOXN3-217ENST00000557572 SLC6A18Q96N87 628 aa5.6□□□□□ -1.51
FOXN3-217ENST00000557572 FCRL3Q96P31 734 aaPredicted RBP5.6□□□□□ -1.51
FOXN3-217ENST00000557572 MEGF9Q9H1U4 602 aa5.6□□□□□ -1.51
FOXN3-217ENST00000557572 ZDHHC9Q9Y397 364 aa5.6□□□□□ -1.51
FOXN3-217ENST00000557572 ZNF28P17035 718 aa5.59□□□□□ -1.51
FOXN3-217ENST00000557572 IL13P35225 146 aa5.59□□□□□ -1.51
FOXN3-217ENST00000557572 CCNFP41002 786 aa5.59□□□□□ -1.51
FOXN3-217ENST00000557572 RGS19P49795 217 aa5.59□□□□□ -1.51
FOXN3-217ENST00000557572 FAM160A1Q05DH4 1040 aa5.59□□□□□ -1.51
FOXN3-217ENST00000557572 ZC3H18Q86VM9 953 aaKnown RBP5.59□□□□□ -1.51
FOXN3-217ENST00000557572 AGAP2Q99490 1192 aa5.59□□□□□ -1.51
FOXN3-217ENST00000557572 CNNM2Q9H8M5 875 aa5.59□□□□□ -1.51
FOXN3-217ENST00000557572 PCDHB14Q9Y5E9 798 aa5.59□□□□□ -1.51
FOXN3-217ENST00000557572 TLR3O15455 904 aaKnown RBP5.58□□□□□ -1.52
FOXN3-217ENST00000557572 IFNGR1P15260 489 aa5.58□□□□□ -1.52
FOXN3-217ENST00000557572 SNAP47Q5SQN1 464 aa5.58□□□□□ -1.52
FOXN3-217ENST00000557572 ATG4CQ96DT6 458 aa5.58□□□□□ -1.52
FOXN3-217ENST00000557572 YTHDC1Q96MU7 727 aaKnown RBP5.58□□□□□ -1.52
FOXN3-217ENST00000557572 FOXS1O43638 330 aa5.57□□□□□ -1.52
FOXN3-217ENST00000557572 CCDC142Q17RM4 750 aa5.57□□□□□ -1.52
FOXN3-217ENST00000557572 NOL9Q5SY16 702 aaKnown RBP5.57□□□□□ -1.52
FOXN3-217ENST00000557572 WWC2Q6AWC2 1192 aa5.57□□□□□ -1.52
FOXN3-217ENST00000557572 NLRC3Q7RTR2 1065 aa5.57□□□□□ -1.52
FOXN3-217ENST00000557572 MRGPRGQ86SM5 289 aa5.57□□□□□ -1.52
FOXN3-217ENST00000557572 C7orf61Q8IZ16 206 aa5.57□□□□□ -1.52
FOXN3-217ENST00000557572 GOLM1Q8NBJ4 401 aa5.57□□□□□ -1.52
FOXN3-217ENST00000557572 GNRHR2Q96P88 292 aa5.57□□□□□ -1.52
FOXN3-217ENST00000557572 DMRT1Q9Y5R6 373 aa5.57□□□□□ -1.52
FOXN3-217ENST00000557572 PPP1R11O60927 126 aaPredicted RBP5.56□□□□□ -1.52
FOXN3-217ENST00000557572 CD3EP07766 207 aa5.56□□□□□ -1.52
FOXN3-217ENST00000557572 GBP2P32456 591 aaPredicted RBP5.56□□□□□ -1.52
FOXN3-217ENST00000557572 TAF1CQ15572 869 aaPredicted RBP5.56□□□□□ -1.52
FOXN3-217ENST00000557572 TCTN3Q6NUS6 607 aa5.56□□□□□ -1.52
FOXN3-217ENST00000557572 BRF1Q92994 677 aa5.56□□□□□ -1.52
FOXN3-217ENST00000557572 GULP1Q9UBP9 304 aa5.56□□□□□ -1.52
FOXN3-217ENST00000557572 USP31Q70CQ4 1352 aa5.55□□□□□ -1.52
FOXN3-217ENST00000557572 PLSCR1O15162 318 aa5.55□□□□□ -1.52
FOXN3-217ENST00000557572 NTRK1P04629 796 aa5.55□□□□□ -1.52
FOXN3-217ENST00000557572 ADH4P08319 380 aa5.55□□□□□ -1.52
FOXN3-217ENST00000557572 DAB2P98082 770 aa5.55□□□□□ -1.52
FOXN3-217ENST00000557572 CCDC144CPQ8IYA2 1237 aa5.55□□□□□ -1.52
FOXN3-217ENST00000557572 MTA3Q9BTC8 594 aa5.55□□□□□ -1.52
FOXN3-217ENST00000557572 BRMS1Q9HCU9 246 aa5.55□□□□□ -1.52
FOXN3-217ENST00000557572 SHOXO15266 292 aa5.54□□□□□ -1.52
FOXN3-217ENST00000557572 KRTAP10-11P60412 298 aa5.54□□□□□ -1.52
FOXN3-217ENST00000557572 POU4F1Q01851 419 aa5.54□□□□□ -1.52
FOXN3-217ENST00000557572 CWF19L2Q2TBE0 894 aaKnown RBP5.54□□□□□ -1.52
FOXN3-217ENST00000557572 RELL1Q8IUW5 271 aa5.54□□□□□ -1.52
FOXN3-217ENST00000557572 C1orf210Q8IVY1 113 aa5.54□□□□□ -1.52
FOXN3-217ENST00000557572 GIMAP8Q8ND71 665 aaPredicted RBP5.54□□□□□ -1.52
FOXN3-217ENST00000557572 RHOVQ96L33 236 aa5.54□□□□□ -1.52
FOXN3-217ENST00000557572 ZSWIM3Q96MP5 696 aa5.54□□□□□ -1.52
FOXN3-217ENST00000557572 PLEKHG4BQ96PX9 1271 aa5.54□□□□□ -1.52
FOXN3-217ENST00000557572 ERBB2P04626 1255 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 C1SP09871 688 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 MLLT6P55198 1093 aaPredicted RBP5.53□□□□□ -1.52
FOXN3-217ENST00000557572 KCNA1Q09470 495 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 ADAM9Q13443 819 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 MIB1Q86YT6 1006 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 KLHL36Q8N4N3 616 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 LARP4BQ92615 738 aaKnown RBP5.53□□□□□ -1.52
FOXN3-217ENST00000557572 RSRP1Q9BUV0 290 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 MMRN2Q9H8L6 949 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 BARX1Q9HBU1 254 aaPredicted RBP5.53□□□□□ -1.52
FOXN3-217ENST00000557572 RNF19AQ9NV58 838 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 FTSJ1Q9UET6 329 aa5.53□□□□□ -1.52
FOXN3-217ENST00000557572 MINDY4BA8MYZ0 360 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 C9IYK1 514 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 ATE1O95260 518 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 STAT5AP42229 794 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 ZNF445P59923 1031 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 MRPS21P82921 87 aaKnown RBP5.52□□□□□ -1.53
FOXN3-217ENST00000557572 NFATC3Q12968 1075 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 PWP1Q13610 501 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 EDAQ92838 391 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 TMEM74Q96NL1 305 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 ROBO2Q9HCK4 1378 aa5.52□□□□□ -1.53
FOXN3-217ENST00000557572 LOC105371045A0A1W2PR82 267 aa5.51□□□□□ -1.53
FOXN3-217ENST00000557572 RAMP2O60895 175 aa5.51□□□□□ -1.53
FOXN3-217ENST00000557572 FUCA1P04066 466 aa5.51□□□□□ -1.53
FOXN3-217ENST00000557572 BMP5P22003 454 aa5.51□□□□□ -1.53
FOXN3-217ENST00000557572 ZC3H6P61129 1189 aaKnown RBP5.51□□□□□ -1.53
FOXN3-217ENST00000557572 AGBL4Q5VU57 503 aa5.51□□□□□ -1.53
FOXN3-217ENST00000557572 CPNE8Q86YQ8 564 aa5.51□□□□□ -1.53
FOXN3-217ENST00000557572 DCP2Q8IU60 420 aaKnown RBP5.51□□□□□ -1.53
FOXN3-217ENST00000557572 FIBCD1Q8N539 461 aa5.51□□□□□ -1.53
FOXN3-217ENST00000557572 LRRC37BQ96QE4 947 aa5.51□□□□□ -1.53
FOXN3-217ENST00000557572 DUSP9Q99956 384 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms