RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 RPRD2Q5VT52 1461 aaKnown RBP6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 TRIOBPQ9H2D6 2365 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 TBX1O43435 398 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 CBFA2T2O43439 604 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 EYA4O95677 639 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 NEK4P51957 841 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 MAP2K1Q02750 393 aaPredicted RBP6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 LRRC41Q15345 812 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 DCAF15Q66K64 600 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 MRPL41Q8IXM3 137 aaKnown RBP6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 AHI1Q8N157 1196 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 GALNT11Q8NCW6 608 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 OSBP2Q969R2 916 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 SMAD5Q99717 465 aaKnown RBP6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 ASPSCR1Q9BZE9 553 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 KLHL25Q9H0H3 589 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 GBP3Q9H0R5 595 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 ABCA3Q99758 1704 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 ADGRL3Q9HAR2 1447 aa6.42□□□□□ -1.38
MTHFD1-216ENST00000557539 SHTN1A0MZ66 631 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 NOP56O00567 594 aaKnown RBP6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 KIF3BO15066 747 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 ADAM11O75078 769 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 RHBDL3P58872 404 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 MCL1Q07820 350 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 PCBP1Q15365 356 aaKnown RBP eCLIP6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 NKG7Q16617 165 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 LHFPL2Q6ZUX7 228 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 CDC37L1Q7L3B6 337 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 BRAPQ7Z569 592 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 BVESQ8NE79 360 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 SLC7A14Q8TBB6 771 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 WDR66Q8TBY9 1149 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 MTMR8Q96EF0 704 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 ORAI2Q96SN7 254 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 MKRN2Q9H000 416 aaKnown RBP6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 TRIM39Q9HCM9 518 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 SLC5A4Q9NY91 659 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 PPP1R9AQ9ULJ8 1098 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 ZNF451Q9Y4E5 1061 aa6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 TNPO3Q9Y5L0 923 aaKnown RBP6.41□□□□□ -1.38
MTHFD1-216ENST00000557539 TMPRSS2O15393 492 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 OPA1O60313 960 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 PPM1BO75688 479 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 ALX3O95076 343 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 NTF4P34130 210 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 ITKQ08881 620 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 MTMR1Q13613 665 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 SETDB1Q15047 1291 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 PKN3Q6P5Z2 889 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 FGD2Q7Z6J4 655 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 ZNF513Q8N8E2 541 aaPredicted RBP6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 CYB5D2Q8WUJ1 264 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 RELTQ969Z4 430 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 SLC52A2Q9HAB3 445 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 AKT3Q9Y243 479 aa6.4□□□□□ -1.38
MTHFD1-216ENST00000557539 ERVK-7P63135 1459 aa6.4□□□□□ -1.39
MTHFD1-216ENST00000557539 SCO2A0A1W2PP80 73 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 BLACEA4D250 179 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 TM4SF5O14894 197 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 KPNA6O60684 536 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 SCGB1D2O95969 90 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 C6orf222P0C671 652 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 CD68P34810 354 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 GNALP38405 381 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 RAB27AP51159 221 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 NEK2P51955 445 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 ZNF460Q14592 562 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 MAP9Q49MG5 647 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 TRIM61Q5EBN2 209 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 EXOSC6Q5RKV6 272 aaKnown RBP6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 ARTNQ5T4W7 220 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 PRAMEF13Q5VWM6 474 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 NECAB2Q7Z6G3 386 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 UBE3DQ7Z6J8 389 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 RNF214Q8ND24 703 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 ADCY4Q8NFM4 1077 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 UBASH3BQ8TF42 649 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 XAGE3Q8WTP9 111 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 BTN2A2Q8WVV5 523 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 FANCD2OSQ96PS1 177 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 CCDC8Q9H0W5 538 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 DISC1Q9NRI5 854 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 KCNK4Q9NYG8 393 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 CRIM1Q9NZV1 1036 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 C10orf71Q711Q0 1435 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 PXDNLA1KZ92 1463 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 ADGRB3O60242 1522 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 SYCP2Q9BX26 1530 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 LAMC1P11047 1609 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 THSD7AQ9UPZ6 1657 aa6.39□□□□□ -1.39
MTHFD1-216ENST00000557539 ASLP04424 464 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 CD247P20963 164 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 GABREP78334 506 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 BIRC2Q13490 618 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 SLBPQ14493 270 aaKnown RBP eCLIP6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 TTLL4Q14679 1199 aa6.38□□□□□ -1.39
MTHFD1-216ENST00000557539 STAT4Q14765 748 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms