RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 NDUFA8P51970 172 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 SNW1Q13573 536 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 IL17AQ16552 155 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 CALCRLQ16602 461 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 ZSCAN23Q3MJ62 389 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 SLC30A10Q6XR72 485 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 DTHD1Q6ZMT9 781 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 RASAL3Q86YV0 1011 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 RIOX2Q8IUF8 465 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 FMR1NBQ8N0W7 255 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 GTF3C2Q8WUA4 911 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 BRI3BPQ8WY22 251 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 NUP62CLQ9H1M0 184 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 ACAD9Q9H845 621 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 COL20A1Q9P218 1284 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 DDX25Q9UHL0 483 aaKnown RBP16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 RPTORQ8N122 1335 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 CNMDO75829 334 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 CIITAP33076 1130 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 LONP1P36776 959 aaKnown RBP16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 NSMFQ6X4W1 530 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 RNF207Q6ZRF8 634 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 ANKRD23Q86SG2 305 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 CHST13Q8NET6 341 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 SYTL5Q8TDW5 730 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 MTMR9Q96QG7 549 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 SPATC1LQ9H0A9 340 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 CLSTN2Q9H4D0 955 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 RABGAP1Q9Y3P9 1069 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 SRCAPQ6ZRS2 3230 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 FRMPD4Q14CM0 1322 aa16.41■□□□□ 0.22
ARHGEF40-208ENST00000557498 BTBD19C9JJ37 291 aa16.4■□□□□ 0.22
ARHGEF40-208ENST00000557498 KINO60870 393 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-208ENST00000557498 RPS6P62753 249 aaKnown RBP16.4■□□□□ 0.22
ARHGEF40-208ENST00000557498 SPECC1Q5M775 1068 aa16.4■□□□□ 0.22
ARHGEF40-208ENST00000557498 RGMBQ6NW40 437 aa16.4■□□□□ 0.22
ARHGEF40-208ENST00000557498 SAPCD2Q86UD0 394 aa16.4■□□□□ 0.22
ARHGEF40-208ENST00000557498 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
ARHGEF40-208ENST00000557498 PDHXO00330 501 aa16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 PEX10O60683 326 aa16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 COPB2P35606 906 aa16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 SYKP43405 635 aa16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 ZNF157P51786 506 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 ZNF445P59923 1031 aa16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 Q4G0T1 1027 aa16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 SYMPKQ92797 1274 aaKnown RBP16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 FBXO40Q9UH90 709 aa16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 KCNH3Q9ULD8 1083 aa16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 TLL2Q9Y6L7 1015 aa16.39■□□□□ 0.21
ARHGEF40-208ENST00000557498 TESPA1A2RU30 521 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 ZNF202O95125 648 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 LETM1O95202 739 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 SLC10A3P09131 477 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 ZNF76P36508 570 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 BAATQ14032 418 aaPredicted RBP16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 USP49Q70CQ1 688 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 LENG9Q96B70 501 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 AK8Q96MA6 479 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 TNMDQ9H2S6 317 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 TXNRD2Q9NNW7 524 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 KCNMB3Q9NPA1 279 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 A1CFQ9NQ94 594 aaKnown RBP16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 RBPJLQ9UBG7 517 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 LCTP09848 1927 aa16.38■□□□□ 0.21
ARHGEF40-208ENST00000557498 SYCE3A1L190 88 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 MANSC4A6NHS7 340 aaPredicted RBP16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 FAM86B1E9PN63 330 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 TBX3O15119 743 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 CTAGE5O15320 804 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 TOMM70O94826 608 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 SLC25A27O95847 323 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 FAM86B2P0C5J1 330 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 CYP2C8P10632 490 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 TXLNAP40222 546 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 UBXN2AP68543 259 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 TMEM266Q2M3C6 531 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 PRR16Q569H4 304 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 FAM43AQ8N2R8 423 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 HAS1Q92839 578 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 EPSTI1Q96J88 318 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 TIGD1Q96MW7 591 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 TAAR1Q96RJ0 339 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 MOV10L1Q9BXT6 1211 aaKnown RBP16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 CYP39A1Q9NYL5 469 aa16.37■□□□□ 0.21
ARHGEF40-208ENST00000557498 IGLV3-22A0A075B6J6 115 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 TECP42680 631 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 TXKP42681 527 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 CAMK4Q16566 473 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 PCNX4Q63HM2 1172 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 RBM43Q6ZSC3 357 aaKnown RBP16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 NCAPG2Q86XI2 1143 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 SLFN12Q8IYM2 578 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 IGSF22Q8N9C0 903 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 IL31RAQ8NI17 732 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 ETNPPLQ8TBG4 499 aa16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 SMCR8Q8TEV9 937 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF40-208ENST00000557498 PARK7Q99497 189 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms