RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 UPF3AQ9H1J1 476 aaKnown RBP7.02□□□□□ -1.29
VPS33B-207ENST00000557470 NKX2-4Q9H2Z4 354 aa7.02□□□□□ -1.29
VPS33B-207ENST00000557470 GPCPD1Q9NPB8 672 aa7.02□□□□□ -1.29
VPS33B-207ENST00000557470 IL23AQ9NPF7 189 aa7.02□□□□□ -1.29
VPS33B-207ENST00000557470 MSRAQ9UJ68 235 aa7.02□□□□□ -1.29
VPS33B-207ENST00000557470 YBX2Q9Y2T7 364 aaKnown RBP7.02□□□□□ -1.29
VPS33B-207ENST00000557470 FCF1Q9Y324 198 aaKnown RBP7.02□□□□□ -1.29
VPS33B-207ENST00000557470 UMODL1Q5DID0 1318 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 BAZ2AQ9UIF9 1905 aaKnown RBP7.01□□□□□ -1.29
VPS33B-207ENST00000557470 CD4P01730 458 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 CLCN1P35523 988 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 ADD2P35612 726 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 RABGGTBP53611 331 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 GJA9P57773 515 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 GUCA2AQ02747 115 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 TFF2Q03403 129 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 CCDC144BQ3MJ40 725 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 CTR9Q6PD62 1173 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 ARMCX2Q7L311 632 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 AMOTL1Q8IY63 956 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.01□□□□□ -1.29
VPS33B-207ENST00000557470 GLMNQ92990 594 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 FAM122AQ96E09 287 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 ABHD16BQ9H3Z7 469 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 HIPK3Q9H422 1215 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 SLC28A3Q9HAS3 691 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 SPC25Q9HBM1 224 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 ASTN1O14525 1302 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 ZBED9Q6R2W3 1325 aa7.01□□□□□ -1.29
VPS33B-207ENST00000557470 GREB1LQ9C091 1923 aaPredicted RBP7□□□□□ -1.29
VPS33B-207ENST00000557470 C11orf97A0A1B0GVM6 126 aaPredicted RBP7□□□□□ -1.29
VPS33B-207ENST00000557470 ATP2A1O14983 1001 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 TLR3O15455 904 aaKnown RBP7□□□□□ -1.29
VPS33B-207ENST00000557470 NDUFB10O96000 172 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 FGBP02675 491 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 IFIT2P09913 472 aaKnown RBP7□□□□□ -1.29
VPS33B-207ENST00000557470 BMP1P13497 986 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 MYOGP15173 224 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 RASA1P20936 1047 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 NKX3-2P78367 333 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 BEX3Q00994 111 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 OTOP2Q7RTS6 562 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 CCDC144CPQ8IYA2 1237 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 CPXCR1Q8N123 301 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 CLASRPQ8N2M8 674 aaKnown RBP7□□□□□ -1.29
VPS33B-207ENST00000557470 MICALL1Q8N3F8 863 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 PRPF38AQ8NAV1 312 aaKnown RBP7□□□□□ -1.29
VPS33B-207ENST00000557470 SLC43A3Q8NBI5 491 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 NOC4LQ9BVI4 516 aaKnown RBP7□□□□□ -1.29
VPS33B-207ENST00000557470 KATNBL1Q9H079 304 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 MTIF3Q9H2K0 278 aaKnown RBP7□□□□□ -1.29
VPS33B-207ENST00000557470 RAVER2Q9HCJ3 691 aaKnown RBP7□□□□□ -1.29
VPS33B-207ENST00000557470 PAG1Q9NWQ8 432 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 SLC4A4Q9Y6R1 1079 aa7□□□□□ -1.29
VPS33B-207ENST00000557470 MCM3APO60318 1980 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 GBF1Q92538 1859 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 F5H6K3 240 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 HOXA2O43364 376 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 GDF9O60383 454 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 ZBED4O75132 1171 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 PTGS1P23219 599 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 KCNQ1P51787 676 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 CCL23P55773 120 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 CNTN2Q02246 1040 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 KLRC3Q07444 240 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 HSP90AB4PQ58FF6 505 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 PPP2R2DQ66LE6 453 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 CXCL17Q6UXB2 119 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 NOL8Q76FK4 1167 aaKnown RBP6.99□□□□□ -1.29
VPS33B-207ENST00000557470 STK11IPQ8N1F8 1099 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 ANKRD35Q8N283 1001 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 KIFC2Q96AC6 838 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 VWCEQ96DN2 955 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 KIF1BPQ96EK5 621 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 C1QTNF1Q9BXJ1 281 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS33B-207ENST00000557470 PUS7LQ9H0K6 701 aaKnown RBP6.99□□□□□ -1.29
VPS33B-207ENST00000557470 TRPV6Q9H1D0 765 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 WNT8AQ9H1J5 351 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 BOLA2Q9H3K6 86 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 SLC38A10Q9HBR0 1119 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 HOMER2Q9NSB8 354 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 NYAP2Q9P242 653 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 FBXO40Q9UH90 709 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 CTDP1Q9Y5B0 961 aaPredicted RBP6.99□□□□□ -1.29
VPS33B-207ENST00000557470 SLC4A7Q9Y6M7 1214 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 DDX49Q9Y6V7 483 aaKnown RBP6.99□□□□□ -1.29
VPS33B-207ENST00000557470 GRIN2DO15399 1336 aa6.99□□□□□ -1.29
VPS33B-207ENST00000557470 IGKV6D-41A0A0C4DH26 115 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 ZBBXA8MT70 800 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 B4GALT4O60513 344 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 CABYRO75952 493 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 CENPBP07199 599 aaPredicted RBP6.98□□□□□ -1.29
VPS33B-207ENST00000557470 ATP2A2P16615 1042 aaKnown RBP6.98□□□□□ -1.29
VPS33B-207ENST00000557470 PSMC6P62333 389 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 TNFAIP2Q03169 654 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 ITGA7Q13683 1181 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 UBE3CQ15386 1083 aa6.98□□□□□ -1.29
VPS33B-207ENST00000557470 FSCN1Q16658 493 aaKnown RBP6.98□□□□□ -1.29
VPS33B-207ENST00000557470 MSS51Q4VC12 460 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms