RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 PPP2R5AQ15172 486 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 ZNF792Q3KQV3 632 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 C4orf46Q504U0 113 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 TMEM67Q5HYA8 995 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 ACBD5Q5T8D3 534 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 CRTC3Q6UUV7 619 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 ZNF227Q86WZ6 799 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 SHISA5Q8N114 240 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 NINJ1Q92982 152 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 BRF1Q92994 677 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 IL17RAQ96F46 866 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 MAP6Q96JE9 813 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 FGD4Q96M96 766 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 CLUHP3Q96NS8 147 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 ZFYVE21Q9BQ24 234 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 ASPSCR1Q9BZE9 553 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 FOXP3Q9BZS1 431 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 CCDC8Q9H0W5 538 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 SLC6A17Q9H1V8 727 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 NKX2-4Q9H2Z4 354 aa4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 GEMIN8Q9NWZ8 242 aaKnown RBP4.15□□□□□ -1.75
HMGB1P14-201ENST00000557424 NPHP3-ACAD11A0A0J9YXS1 232 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 SHISA3A0PJX4 238 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 FAM83GA6ND36 823 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 GSG1L2A8MUP6 293 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 H0Y8X5 98 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 AURKAO14965 403 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 MEFVO15553 781 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 NPHS1O60500 1241 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 MAFKO60675 156 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 EFCAB14O75071 495 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 FKTNO75072 461 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 RAPGEF3O95398 923 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 ESR1P03372 595 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 SDSP20132 328 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 KCNJ6P48051 423 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 CHRNA2Q15822 529 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 GTF2IRD2BQ6EKJ0 949 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 RSPO2Q6UXX9 243 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 GTF2IRD2Q86UP8 949 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 AFAP1L2Q8N4X5 818 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 MYLIPQ8WY64 445 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 ASIC4Q96FT7 647 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 CCDC136Q96JN2 1154 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 SMAD5Q99717 465 aaKnown RBP4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 ARPC5LQ9BPX5 153 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 TARS2Q9BW92 718 aaKnown RBP4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 SPATA9Q9BWV2 254 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 CAAP1Q9H8G2 361 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 ARNT2Q9HBZ2 717 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 CRTAC1Q9NQ79 661 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 NUDT5Q9UKK9 219 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 PLAAQ9Y263 795 aa4.14□□□□□ -1.75
HMGB1P14-201ENST00000557424 CCDC189A1A4V9 331 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 C2orf71A6NGG8 1288 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 AQP7O14520 342 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 SH3BP5O60239 455 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 SCG5P05408 212 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 GUCY2FP51841 1108 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 BNIP3Q12983 259 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 SNW1Q13573 536 aaKnown RBP4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 KCNMB1Q16558 191 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 SPTY2D1Q68D10 685 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 CEP128Q6ZU80 1094 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 MAMDC2Q7Z304 686 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 SCUBE1Q8IWY4 988 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 TTC8Q8TAM2 541 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 ABHD4Q8TB40 342 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 KIRREL1Q96J84 757 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 EXOC2Q96KP1 924 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 PTCHD1Q96NR3 888 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 RTFDC1Q9BY42 306 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 KRTAP17-1Q9BYP8 105 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 TRIM8Q9BZR9 551 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 ZIM2Q9NZV7 527 aa4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 NOB1Q9ULX3 412 aaKnown RBP4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 COA3Q9Y2R0 106 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P14-201ENST00000557424 STXBP3O00186 592 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 KIF3BO15066 747 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 GSTA4O15217 222 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 FGF10O15520 208 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 AKAP10O43572 662 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 RASGRP1O95267 797 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 EYA4O95677 639 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 HPXP02790 462 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 ITGAVP06756 1048 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 ZGLP1P0C6A0 271 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 ATF3P18847 181 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 LTBRP36941 435 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 EPHB1P54762 984 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 RTP1P59025 263 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 PPP2R2AP63151 447 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 SCRN1Q12765 414 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 MTMR1Q13613 665 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 TESK1Q15569 626 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 CT47A1Q5JQC4 288 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 YOD1Q5VVQ6 348 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 CCSAPQ6IQ19 270 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 NSMFQ6X4W1 530 aa4.12□□□□□ -1.75
HMGB1P14-201ENST00000557424 ZNF574Q6ZN55 896 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms