RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	KIF5B	P33176	963 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	METAP2	P50579	478 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	NEK4	P51957	841 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	EVC	P57679	992 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	ANAPC15	P60006	121 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	RTN1	Q16799	776 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	TMEM63B	Q5T3F8	832 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	ANO1	Q5XXA6	986 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	FBXL16	Q8N461	479 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	FAM133A	Q8N9E0	248 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	PHKB	Q93100	1093 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	EPAS1	Q99814	870 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	AMN	Q9BXJ7	453 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	PCDHA1	Q9Y5I3	950 aa		10.22	□□□□□ -0.77
PRKCH-222	ENST00000556778	CENPF	P49454	3210 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	PTPDC1	A2A3K4	754 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	HMGCR	P04035	888 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	COPB2	P35606	906 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	RPS6	P62753	249 aa	Known RBP	10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	MMRN1	Q13201	1228 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	NBR1	Q14596	966 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	NTRK3	Q16288	839 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	TKFC	Q3LXA3	575 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	MAP3K21	Q5TCX8	1036 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	RNF207	Q6ZRF8	634 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	NECAB1	Q8N987	351 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	RRP36	Q96EU6	259 aa	Known RBP	10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	DEFB118	Q96PH6	123 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	TAAR1	Q96RJ0	339 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	TINF2	Q9BSI4	451 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	SPZ1	Q9BXG8	430 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	BACH2	Q9BYV9	841 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	RNF208	Q9H0X6	261 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778	FBXO40	Q9UH90	709 aa		10.21	□□□□□ -0.77
PRKCH-222	ENST00000556778		A0A0G2JMZ2	1700 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	CFB	P00751	764 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	SMARCA1	P28370	1054 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	CNGA1	P29973	690 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	RBM25	P49756	843 aa	Known RBP	10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	GNAQ	P50148	359 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	SCRN1	Q12765	414 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	ME3	Q16798	604 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	OLFML2B	Q68BL8	750 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	ADGRD1	Q6QNK2	874 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	EEPD1	Q7L9B9	569 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	CNTNAP5	Q8WYK1	1306 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	LENG1	Q96BZ8	264 aa	Predicted RBP	10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	SHISA4	Q96DD7	197 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	LZTS2	Q9BRK4	669 aa		10.2	□□□□□ -0.78
PRKCH-222	ENST00000556778	ABCB11	O95342	1321 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	RPTOR	Q8N122	1335 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	ADCY6	O43306	1168 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	UBXN2A	P68543	259 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	ST3GAL1	Q11201	340 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	PKN1	Q16512	942 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	MFSD14C	Q5VZR4	134 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	WWC2	Q6AWC2	1192 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	USP17L6P	Q6QN14	398 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	HEATR3	Q7Z4Q2	680 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	ZNF274	Q96GC6	653 aa	Predicted RBP	10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	KATNBL1	Q9H079	304 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	HMX1	Q9NP08	348 aa	Predicted RBP	10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	PAK6	Q9NQU5	681 aa	Predicted RBP	10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	PDGFC	Q9NRA1	345 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	RBM28	Q9NW13	759 aa	Known RBP	10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	DIS3	Q9Y2L1	958 aa	Known RBP	10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	MRPL11	Q9Y3B7	192 aa	Known RBP	10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	BRCA2	P51587	3418 aa		10.19	□□□□□ -0.78
PRKCH-222	ENST00000556778	MYH8	P13535	1937 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	TK2	O00142	265 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	CD2BP2	O95400	341 aa	Known RBP	10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	CTDNEP1	O95476	244 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	CYBA	P13498	195 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	MAMDC4	Q6UXC1	1216 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	ARMCX2	Q7L311	632 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	FCHSD1	Q86WN1	690 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	RGS22	Q8NE09	1264 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	U2AF1L4	Q8WU68	220 aa	Known RBP	10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	AIFM3	Q96NN9	605 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	SLC26A6	Q9BXS9	759 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	GJB4	Q9NTQ9	266 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	SLC5A4	Q9NY91	659 aa		10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	SEC63	Q9UGP8	760 aa	Known RBP	10.18	□□□□□ -0.78
PRKCH-222	ENST00000556778	PFAS	O15067	1338 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	GRXCR2	A6NFK2	248 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	STXBP3	O00186	592 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	MEIS2	O14770	477 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	PFKFB2	O60825	505 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	SGPL1	O95470	568 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	TFRC	P02786	760 aa	Known RBP	10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	GJB1	P08034	283 aa		10.17	□□□□□ -0.78
PRKCH-222	ENST00000556778	EIF2AK2	P19525	551 aa	Known RBP	10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms