RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PXMP2Q9NR77 195 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 TBX21Q9UL17 535 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 GRIN2DO15399 1336 aa11.99□□□□□ -0.49
SHMT2-224ENST00000556737 FRMPD4Q14CM0 1322 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 PNMA6FA0A0J9YX94 578 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 CFBP00751 764 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 RXRAP19793 462 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 PPP2R5BQ15173 497 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 LRIT3Q3SXY7 679 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 TSGA10IPQ3SY00 556 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 CCDC62Q6P9F0 684 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 FAM126BQ8IXS8 530 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 NSUN6Q8TEA1 469 aaKnown RBP11.98□□□□□ -0.49
SHMT2-224ENST00000556737 SCFD2Q8WU76 684 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 COPS5Q92905 334 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 BADQ92934 168 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 KCNB2Q92953 911 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 LRCH3Q96II8 777 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 TOX2Q96NM4 488 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 RMDN3Q96TC7 470 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 MPHOSPH6Q99547 160 aaKnown RBP11.98□□□□□ -0.49
SHMT2-224ENST00000556737 AP5M1Q9H0R1 490 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 PRKAG2Q9UGJ0 569 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 PCDHA1Q9Y5I3 950 aa11.98□□□□□ -0.49
SHMT2-224ENST00000556737 LAMA2P24043 3122 aaKnown RBP11.98□□□□□ -0.49
SHMT2-224ENST00000556737 MROH7Q68CQ1 1323 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 CCDC69A6NI79 296 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 ARVCFO00192 962 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 EIF2AK2P19525 551 aaKnown RBP11.97□□□□□ -0.49
SHMT2-224ENST00000556737 HOXA13P31271 388 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-224ENST00000556737 PURAQ00577 322 aaKnown RBP11.97□□□□□ -0.49
SHMT2-224ENST00000556737 EXOSC10Q01780 885 aaKnown RBP11.97□□□□□ -0.49
SHMT2-224ENST00000556737 RNF20Q5VTR2 975 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 RAB11FIP4Q86YS3 637 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
SHMT2-224ENST00000556737 OR6J1Q8NGC5 347 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 IL31RAQ8NI17 732 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 CTCFLQ8NI51 663 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-224ENST00000556737 TCEANC2Q96MN5 208 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 NEK1Q96PY6 1258 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 IWS1Q96ST2 819 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 LBHD1Q9BQE6 289 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-224ENST00000556737 PDCD2LQ9BRP1 358 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 TANC1Q9C0D5 1861 aa11.97□□□□□ -0.49
SHMT2-224ENST00000556737 NKRFO15226 690 aaKnown RBP eCLIP11.96□□□□□ -0.49
SHMT2-224ENST00000556737 CABYRO75952 493 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 RGS20O76081 388 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 CD4P01730 458 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 SMARCA1P28370 1054 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 KIF5BP33176 963 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 EPHB4P54760 987 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 PSMC6P62333 389 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 ARHGAP1Q07960 439 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 C9orf50Q5SZB4 431 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 ARHGEF16Q5VV41 709 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 APOA5Q6Q788 366 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 NFXL1Q6ZNB6 911 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 TMTC3Q6ZXV5 915 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 TMTC2Q8N394 836 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 SAMD3Q8N6K7 520 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 PIBF1Q8WXW3 757 aa11.96□□□□□ -0.49
SHMT2-224ENST00000556737 MAP3K20Q9NYL2 800 aaKnown RBP11.96□□□□□ -0.49
SHMT2-224ENST00000556737 CNTNAP5Q8WYK1 1306 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 A6NJR5 290 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 DCDC2CA8MYV0 355 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 B4DLN1 442 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 ZEB2O60315 1214 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 NR3C2P08235 984 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 CALM1P0DP23 149 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 CALM2P0DP24 149 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 CALM3P0DP25 149 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 TXNP10599 105 aaKnown RBP11.95□□□□□ -0.5
SHMT2-224ENST00000556737 HSPA4P34932 840 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 CPT1AP50416 773 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 MRPL12P52815 198 aaKnown RBP11.95□□□□□ -0.5
SHMT2-224ENST00000556737 TRAF1Q13077 416 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 ITGA7Q13683 1181 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 TTLL4Q14679 1199 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 PGM5Q15124 567 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 STXBP2Q15833 593 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 MICU3Q86XE3 530 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 CMTR1Q8N1G2 835 aaKnown RBP11.95□□□□□ -0.5
SHMT2-224ENST00000556737 RRP36Q96EU6 259 aaKnown RBP11.95□□□□□ -0.5
SHMT2-224ENST00000556737 LZTS2Q9BRK4 669 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 TMEM39AQ9NV64 488 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 BRPF3Q9ULD4 1205 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 SLC12A7Q9Y666 1083 aa11.95□□□□□ -0.5
SHMT2-224ENST00000556737 NID2Q14112 1375 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 GCOM1H8Y6P7 765 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-224ENST00000556737 POLR2MP0CAP2 368 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 RAG1P15918 1043 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 GNAQP50148 359 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 FUT2Q10981 343 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 KRT32Q14532 448 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 SHHQ15465 462 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 LY6KQ17RY6 165 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 SEPT14Q6ZU15 432 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 DHX32Q7L7V1 743 aaKnown RBP11.94□□□□□ -0.5
SHMT2-224ENST00000556737 POLR3EQ9NVU0 708 aa11.94□□□□□ -0.5
SHMT2-224ENST00000556737 SNX14Q9Y5W7 946 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms