RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 EVI5O60447 810 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 NR3C2P08235 984 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 POLR2MP0CAP2 368 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 CST5P28325 142 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-211ENST00000556636 PDIA3P30101 505 aaKnown RBP12.39□□□□□ -0.43
GABRB3-211ENST00000556636 PDE4DQ08499 809 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 PPP2R5BQ15173 497 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 NTRK3Q16288 839 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 KCNA10Q16322 511 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 DUSP28Q4G0W2 176 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 CCDC62Q6P9F0 684 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 SLC39A5Q6ZMH5 540 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 FERMT2Q96AC1 680 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 PDCD2LQ9BRP1 358 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
GABRB3-211ENST00000556636 Q9Y3F1 56 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 CYP46A1Q9Y6A2 500 aa12.39□□□□□ -0.43
GABRB3-211ENST00000556636 V9GY48 417 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-211ENST00000556636 KBTBD13C9JR72 458 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 ARIH2O95376 493 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
GABRB3-211ENST00000556636 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
GABRB3-211ENST00000556636 ATN1P54259 1190 aaPredicted RBP12.38□□□□□ -0.43
GABRB3-211ENST00000556636 ANAPC15P60006 121 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 FGD1P98174 961 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 SNX17Q15036 470 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 C8orf34Q49A92 452 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 ARHGEF16Q5VV41 709 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 USP17L6PQ6QN14 398 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 VSIG10LQ86VR7 867 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 IL31RAQ8NI17 732 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 LARP6Q9BRS8 491 aaKnown RBP12.38□□□□□ -0.43
GABRB3-211ENST00000556636 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
GABRB3-211ENST00000556636 SEC63Q9UGP8 760 aaKnown RBP12.38□□□□□ -0.43
GABRB3-211ENST00000556636 A0A1W2PQ45 241 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-211ENST00000556636 A0A1W2PQY0 241 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 B4DLN1 442 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 PIK3CDO00329 1044 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 EIF3JO75822 258 aaKnown RBP12.37□□□□□ -0.43
GABRB3-211ENST00000556636 RGS20O76081 388 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-211ENST00000556636 METAP2P50579 478 aaKnown RBP eCLIP12.37□□□□□ -0.43
GABRB3-211ENST00000556636 MRPL12P52815 198 aaKnown RBP12.37□□□□□ -0.43
GABRB3-211ENST00000556636 ACLYP53396 1101 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 BEX3Q00994 111 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 STXBP2Q15833 593 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 PKN1Q16512 942 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 GNASQ5JWF2 1037 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 C1orf53Q5VUE5 145 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
GABRB3-211ENST00000556636 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 SCFD2Q8WU76 684 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 COPS5Q92905 334 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 ALDH8A1Q9H2A2 487 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-211ENST00000556636 NR2E3Q9Y5X4 410 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 NID2Q14112 1375 aa12.37□□□□□ -0.43
GABRB3-211ENST00000556636 MOXD2PA6NHM9 499 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 ASGR1P07306 291 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 CDK7P50613 346 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 MRPS9P82933 396 aaKnown RBP12.36□□□□□ -0.43
GABRB3-211ENST00000556636 PGM5Q15124 567 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 WWC2Q6AWC2 1192 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 SEPT14Q6ZU15 432 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 C7orf61Q8IZ16 206 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 GPKOWQ92917 476 aaPredicted RBP eCLIP12.36□□□□□ -0.43
GABRB3-211ENST00000556636 ZNF274Q96GC6 653 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-211ENST00000556636 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-211ENST00000556636 MPHOSPH6Q99547 160 aaKnown RBP12.36□□□□□ -0.43
GABRB3-211ENST00000556636 PRO3102Q9H379 93 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 PSTPIP2Q9H939 334 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 SPC25Q9HBM1 224 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 NCOA5Q9HCD5 579 aaKnown RBP12.36□□□□□ -0.43
GABRB3-211ENST00000556636 PDRG1Q9NUG6 133 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 DDX41Q9UJV9 622 aaKnown RBP12.36□□□□□ -0.43
GABRB3-211ENST00000556636 NAP1L2Q9ULW6 460 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-211ENST00000556636 FRMPD3Q5JV73 1810 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 FRMPD4Q14CM0 1322 aa12.36□□□□□ -0.43
GABRB3-211ENST00000556636 CEP290O15078 2479 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 STXBP3O00186 592 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
GABRB3-211ENST00000556636 TXNP10599 105 aaKnown RBP12.35□□□□□ -0.43
GABRB3-211ENST00000556636 RTP1P59025 263 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 CCT2P78371 535 aaKnown RBP12.35□□□□□ -0.43
GABRB3-211ENST00000556636 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
GABRB3-211ENST00000556636 LY6KQ17RY6 165 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 HEATR3Q7Z4Q2 680 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 PCSK9Q8NBP7 692 aaKnown RBP12.35□□□□□ -0.43
GABRB3-211ENST00000556636 AP5M1Q9H0R1 490 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 BARHL2Q9NY43 387 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 ZMYND8Q9ULU4 1186 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-211ENST00000556636 GRIN2DO15399 1336 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 ELP1O95163 1332 aa12.35□□□□□ -0.43
GABRB3-211ENST00000556636 A6NJR5 290 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 ADAMTS3O15072 1205 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 NKRFO15226 690 aaKnown RBP eCLIP12.34□□□□□ -0.43
GABRB3-211ENST00000556636 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms