RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 PRR19A6NJB7 356 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 F8W031 263 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-239ENST00000556315 H3BRJ5 948 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 CETPP11597 493 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 SPINK2P20155 84 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 GJA8P48165 433 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 RBM5P52756 815 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-239ENST00000556315 DNAJC14Q6Y2X3 702 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-239ENST00000556315 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 CLEC10AQ8IUN9 316 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 CERS5Q8N5B7 392 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 UBASH3BQ8TF42 649 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 PCDHAC2Q9Y5I4 1007 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 CSADQ9Y600 493 aa6.17□□□□□ -1.42
ATXN3-239ENST00000556315 KIAA0100Q14667 2235 aaKnown RBP6.17□□□□□ -1.42
ATXN3-239ENST00000556315 LRRC37AA6NMS7 1700 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 HMX2A2RU54 273 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 ANKRD33BA6NCL7 494 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 CCL5P13501 91 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 IL1R1P14778 569 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 KLRK1P26718 216 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 GRK4P32298 578 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 PSMC4P43686 418 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 UBXN2AP68543 259 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 COL19A1Q14993 1142 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 C17orf99Q6UX52 265 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 C15orf52Q6ZUT6 534 aaKnown RBP6.16□□□□□ -1.42
ATXN3-239ENST00000556315 ERO1BQ86YB8 467 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 FAM20CQ8IXL6 584 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 RAET1EQ8TD07 263 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 SNX29Q8TEQ0 813 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 FAM83CQ9BQN1 747 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 DBNDD2Q9BQY9 259 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 RNF208Q9H0X6 261 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 DZANK1Q9NVP4 752 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 KANSL3Q9P2N6 904 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 ZNF70Q9UC06 446 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-239ENST00000556315 MAP3K2Q9Y2U5 619 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
ATXN3-239ENST00000556315 KDM3BQ7LBC6 1761 aa6.16□□□□□ -1.42
ATXN3-239ENST00000556315 COL4A1P02462 1669 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 A6NHS1 94 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 BTBD19C9JJ37 291 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 ELL2O00472 640 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-239ENST00000556315 SOX1O00570 391 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-239ENST00000556315 GPR182O15218 404 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 TREHO43280 583 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 SGPL1O95470 568 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 IGKV5-2P06315 115 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 ACPPP15309 386 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 TNNI2P48788 182 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 PLCB3Q01970 1234 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 CHRNDQ07001 517 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 NEXNQ0ZGT2 675 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 SNAPC2Q13487 334 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 VGLL4Q14135 290 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 ANKRD34AQ69YU3 496 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 KSR2Q6VAB6 950 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 ZNF804AQ7Z570 1209 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 C1orf127Q8N9H9 656 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-239ENST00000556315 U2AF1L4Q8WU68 220 aaKnown RBP6.15□□□□□ -1.42
ATXN3-239ENST00000556315 PMEPA1Q969W9 287 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 RUNDC1Q96C34 613 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 TEPSINQ96N21 525 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 PLA2G12BQ9BX93 195 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 NIF3L1Q9GZT8 377 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 STAP2Q9UGK3 403 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 STXBP5LQ9Y2K9 1186 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 RIPOR2Q9Y4F9 1068 aa6.15□□□□□ -1.42
ATXN3-239ENST00000556315 OAS3Q9Y6K5 1087 aaKnown RBP6.15□□□□□ -1.42
ATXN3-239ENST00000556315 SCN9AQ15858 1988 aa6.15□□□□□ -1.43
ATXN3-239ENST00000556315 SSC5DA1L4H1 1573 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 PI4KAP2A4QPH2 592 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 MEGF11A6BM72 1044 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 PHACTR2O75167 634 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 ADAMTS4O75173 837 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 TNFRSF21O75509 655 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 TAF5LO75529 589 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 FARP2O94887 1054 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-239ENST00000556315 IGHA2P01877 340 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 CSF1RP07333 972 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 ZNF853P0CG23 659 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 CES1P23141 567 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 BMP8BP34820 402 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 GRIK1P39086 918 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 PREPP48147 710 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 IRAK1P51617 712 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 GP2P55259 537 aaKnown RBP6.14□□□□□ -1.43
ATXN3-239ENST00000556315 FGD1P98174 961 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 PPIL2Q13356 520 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 CCDC30Q5VVM6 783 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 DTX1Q86Y01 620 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 DEFB123Q8N688 67 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 PI4KAP1Q8N8J0 262 aa6.14□□□□□ -1.43
ATXN3-239ENST00000556315 HOOK2Q96ED9 719 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms