RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 FBXO16Q8IX29 292 aaPredicted RBP14.81□□□□□ -0.04
APEX1-213ENST00000556296 IL27Q8NEV9 243 aa14.81□□□□□ -0.04
APEX1-213ENST00000556296 TMEM87BQ96K49 555 aa14.81□□□□□ -0.04
APEX1-213ENST00000556296 TTC14Q96N46 770 aa14.81□□□□□ -0.04
APEX1-213ENST00000556296 ZSCAN10Q96SZ4 725 aaPredicted RBP14.81□□□□□ -0.04
APEX1-213ENST00000556296 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
APEX1-213ENST00000556296 SLC28A3Q9HAS3 691 aa14.81□□□□□ -0.04
APEX1-213ENST00000556296 ZSWIM6Q9HCJ5 1215 aa14.81□□□□□ -0.04
APEX1-213ENST00000556296 CYP46A1Q9Y6A2 500 aa14.81□□□□□ -0.04
APEX1-213ENST00000556296 PTPDC1A2A3K4 754 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 CTAGE5O15320 804 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 KPNA6O60684 536 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 PFKMP08237 780 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 SNAP25P60880 206 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 IRX5P78411 483 aaPredicted RBP14.8□□□□□ -0.04
APEX1-213ENST00000556296 DUSP28Q4G0W2 176 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 RASIP1Q5U651 963 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 TAPT1Q6NXT6 567 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 BTNL9Q6UXG8 535 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 RUFY3Q7L099 469 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 C16orf59Q7L2K0 433 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 CHST3Q7LGC8 479 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 DGKHQ86XP1 1220 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 ZKSCAN3Q9BRR0 538 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 WDR11Q9BZH6 1224 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 RANBP17Q9H2T7 1088 aaKnown RBP14.8□□□□□ -0.04
APEX1-213ENST00000556296 TNKSO95271 1327 aa14.8□□□□□ -0.04
APEX1-213ENST00000556296 IFIT3O14879 490 aaKnown RBP14.79□□□□□ -0.04
APEX1-213ENST00000556296 NKRFO15226 690 aaKnown RBP eCLIP14.79□□□□□ -0.04
APEX1-213ENST00000556296 RPS6KB1P23443 525 aa14.79□□□□□ -0.04
APEX1-213ENST00000556296 ANTXR2P58335 489 aa14.79□□□□□ -0.04
APEX1-213ENST00000556296 FGD1P98174 961 aa14.79□□□□□ -0.04
APEX1-213ENST00000556296 EXOSC10Q01780 885 aaKnown RBP14.79□□□□□ -0.04
APEX1-213ENST00000556296 BAATQ14032 418 aaPredicted RBP14.79□□□□□ -0.04
APEX1-213ENST00000556296 MUM1L1Q5H9M0 696 aa14.79□□□□□ -0.04
APEX1-213ENST00000556296 TMEM67Q5HYA8 995 aa14.79□□□□□ -0.04
APEX1-213ENST00000556296 MORC4Q8TE76 937 aa14.79□□□□□ -0.04
APEX1-213ENST00000556296 ATXN2LQ8WWM7 1075 aaKnown RBP14.79□□□□□ -0.04
APEX1-213ENST00000556296 TMEM47Q9BQJ4 181 aa14.79□□□□□ -0.04
APEX1-213ENST00000556296 UPF3BQ9BZI7 483 aaKnown RBP14.79□□□□□ -0.04
APEX1-213ENST00000556296 SLC4A7Q9Y6M7 1214 aa14.79□□□□□ -0.04
APEX1-213ENST00000556296 ASTN1O14525 1302 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 B4GALT4O60513 344 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 ACTN1P12814 892 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 ALDH5A1P51649 535 aaPredicted RBP14.78□□□□□ -0.04
APEX1-213ENST00000556296 CCL23P55773 120 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 PDE4DQ08499 809 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 WTAPQ15007 396 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 RABEP1Q15276 862 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 IFIT1BQ5T764 474 aaKnown RBP14.78□□□□□ -0.04
APEX1-213ENST00000556296 TTBK2Q6IQ55 1244 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 RNF207Q6ZRF8 634 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 OTOP2Q7RTS6 562 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 TMTC2Q8N394 836 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 ENAHQ8N8S7 591 aaPredicted RBP14.78□□□□□ -0.04
APEX1-213ENST00000556296 OR6J1Q8NGC5 347 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 MTG1Q9BT17 334 aaPredicted RBP14.78□□□□□ -0.04
APEX1-213ENST00000556296 MAF1Q9H063 256 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 PDGFCQ9NRA1 345 aa14.78□□□□□ -0.04
APEX1-213ENST00000556296 ZBBXA8MT70 800 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 GRXCR1A8MXD5 290 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 SH2B2O14492 632 aaPredicted RBP14.77□□□□□ -0.05
APEX1-213ENST00000556296 SNHG28P0DPA3 235 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 CPA1P15085 419 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 IGFBP4P22692 258 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 CALML3P27482 149 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 SLC16A2P36021 539 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 PBX2P40425 430 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 PPP2R5BQ15173 497 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 SEC23AQ15436 765 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 RETREG2Q8NC44 543 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 DNERQ8NFT8 737 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 IGDCC4Q8TDY8 1250 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 PPM1EQ8WY54 764 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 TCEANC2Q96MN5 208 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 KIF2CQ99661 725 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 NOC4LQ9BVI4 516 aaKnown RBP14.77□□□□□ -0.05
APEX1-213ENST00000556296 TRPV6Q9H1D0 765 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 ALDH8A1Q9H2A2 487 aaPredicted RBP14.77□□□□□ -0.05
APEX1-213ENST00000556296 PRDM12Q9H4Q4 367 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 GPCPD1Q9NPB8 672 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 PRDM6Q9NQX0 595 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 PDRG1Q9NUG6 133 aa14.77□□□□□ -0.05
APEX1-213ENST00000556296 FRMPD2Q68DX3 1309 aaPredicted RBP14.76□□□□□ -0.05
APEX1-213ENST00000556296 MYL3P08590 195 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 PDHBP11177 359 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 RFC2P35250 354 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 LIFRP42702 1097 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 NEK4P51957 841 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 PSMC6P62333 389 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 COL9A3Q14050 684 aaPredicted RBP14.76□□□□□ -0.05
APEX1-213ENST00000556296 GPATCH4Q5T3I0 446 aaKnown RBP14.76□□□□□ -0.05
APEX1-213ENST00000556296 Q6ZUG5 572 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 FBXL16Q8N461 479 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 SCFD2Q8WU76 684 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 LRRC2Q9BYS8 371 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 KAT14Q9H8E8 782 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 THEGQ9P2T0 379 aa14.76□□□□□ -0.05
APEX1-213ENST00000556296 NOD1Q9Y239 953 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms