RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 CLIP2Q9UDT6 1046 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 SLC4A7Q9Y6M7 1214 aa12.84□□□□□ -0.35
CHGA-205ENST00000556098 F5H6K3 240 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 PRC1O43663 620 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 CPA1P15085 419 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 GJA9P57773 515 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 PSMC6P62333 389 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 KLRC3Q07444 240 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 PPARAQ07869 468 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 NBR1Q14596 966 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 PPP2R5BQ15173 497 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 DEFB128Q7Z7B8 93 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 TLK2Q86UE8 772 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 SGMS1Q86VZ5 419 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 CCDC83Q8IWF9 413 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 LRRC47Q8N1G4 583 aaKnown RBP12.83□□□□□ -0.36
CHGA-205ENST00000556098 MSL3Q8N5Y2 521 aaKnown RBP12.83□□□□□ -0.36
CHGA-205ENST00000556098 HERVK_113Q902F9 699 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 BRF1Q92994 677 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 AP5M1Q9H0R1 490 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 TRPV6Q9H1D0 765 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 ABHD16BQ9H3Z7 469 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 DDX49Q9Y6V7 483 aaKnown RBP12.83□□□□□ -0.36
CHGA-205ENST00000556098 MYH7BA7E2Y1 1941 aa12.83□□□□□ -0.36
CHGA-205ENST00000556098 ERICH2A1L162 156 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 STX6O43752 255 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 CDKL5O76039 1030 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 FGRP09769 529 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 CST5P28325 142 aaPredicted RBP12.82□□□□□ -0.36
CHGA-205ENST00000556098 ITGA7Q13683 1181 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 RASIP1Q5U651 963 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 CTR9Q6PD62 1173 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 CPLX2Q6PUV4 134 aaKnown RBP12.82□□□□□ -0.36
CHGA-205ENST00000556098 PRPF38AQ8NAV1 312 aaKnown RBP12.82□□□□□ -0.36
CHGA-205ENST00000556098 ESR2Q92731 530 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 UPF3AQ9H1J1 476 aaKnown RBP12.82□□□□□ -0.36
CHGA-205ENST00000556098 ZNF287Q9HBT7 754 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 MTMR7Q9Y216 660 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 HCN4Q9Y3Q4 1203 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 TAF6LQ9Y6J9 622 aa12.82□□□□□ -0.36
CHGA-205ENST00000556098 SIP14410 1827 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 DNAJC25-GNG10A0A024R161 153 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 DYNC1LI2O43237 492 aaPredicted RBP12.81□□□□□ -0.36
CHGA-205ENST00000556098 GTPBP6O43824 516 aaPredicted RBP12.81□□□□□ -0.36
CHGA-205ENST00000556098 PRDM1O75626 825 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 BAG4O95429 457 aaKnown RBP12.81□□□□□ -0.36
CHGA-205ENST00000556098 CD4P01730 458 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 GJB2P29033 226 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 CHMP4BP1P59074 171 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 HAND2P61296 217 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 AAK1Q2M2I8 961 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 MAMDC4Q6UXC1 1216 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 PPP1R13LQ8WUF5 828 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 C1QTNF1Q9BXJ1 281 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 PRRC2BQ5JSZ5 2229 aaKnown RBP12.81□□□□□ -0.36
CHGA-205ENST00000556098 TTC28Q96AY4 2481 aa12.81□□□□□ -0.36
CHGA-205ENST00000556098 FAM86C2PA6NEL3 165 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 SH2B2O14492 632 aaPredicted RBP12.8□□□□□ -0.36
CHGA-205ENST00000556098 ORC4O43929 436 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 ZEB2O60315 1214 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 B4GALT4O60513 344 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 LARGE1O95461 756 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 ZSCAN22P10073 491 aaPredicted RBP12.8□□□□□ -0.36
CHGA-205ENST00000556098 ALAS1P13196 640 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 ATP2A2P16615 1042 aaKnown RBP12.8□□□□□ -0.36
CHGA-205ENST00000556098 SNAP25P60880 206 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 PDE4BQ07343 736 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 FSCN1Q16658 493 aaKnown RBP12.8□□□□□ -0.36
CHGA-205ENST00000556098 FAM47CQ5HY64 1035 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 KRT40Q6A162 431 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
CHGA-205ENST00000556098 FBXO16Q8IX29 292 aaPredicted RBP12.8□□□□□ -0.36
CHGA-205ENST00000556098 RPUSD2Q8IZ73 545 aaKnown RBP12.8□□□□□ -0.36
CHGA-205ENST00000556098 FGD4Q96M96 766 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 FBXO40Q9UH90 709 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 ASTN1O14525 1302 aa12.8□□□□□ -0.36
CHGA-205ENST00000556098 TET1Q8NFU7 2136 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 NLRC5Q86WI3 1866 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 CCDC196A0A1B0GTZ2 297 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 CA3P07451 260 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 CYP2C9P11712 490 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 RASA1P20936 1047 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 SYT1P21579 422 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 PDIA3P30101 505 aaKnown RBP12.79□□□□□ -0.36
CHGA-205ENST00000556098 SYNE3Q6ZMZ3 975 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 IQCA1Q86XH1 822 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 ZNF444Q8N0Y2 327 aaPredicted RBP12.79□□□□□ -0.36
CHGA-205ENST00000556098 CHST13Q8NET6 341 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 ARNTL2Q8WYA1 636 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 NOC4LQ9BVI4 516 aaKnown RBP12.79□□□□□ -0.36
CHGA-205ENST00000556098 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
CHGA-205ENST00000556098 WNT8AQ9H1J5 351 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 EPHX3Q9H6B9 360 aa12.79□□□□□ -0.36
CHGA-205ENST00000556098 ACAD9Q9H845 621 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms